Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  213 bits (542), Expect = 4e-59
 Identities = 153/501 (30%), Positives = 256/501 (51%), Gaps = 70/501 (13%)

Query: 567  VQPQPECSFLALPDQHEAEFSIIIQAPKSNCSIGEHYFHVTRRAISHPINQRKYYLTLFN 626
            +Q Q   S L L  Q++ +FS+  +   S       +  +  RAIS   ++ +       
Sbjct: 140  IQAQISDSVLILLGQNKGQFSLEAKETLSR------FRPLLERAISDIEHKEE-----LQ 188

Query: 627  DITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSES 686
             + E++  E  LR + + A QA +++++FLA++SHELRTP+ A+LGL++IL   L S + 
Sbjct: 189  KLVEIRTRE--LRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILRGELTSYQV 246

Query: 687  QLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKE 746
            +LL     +SAE L + +NDILD S+IE+    L     +L  +L   L      AQ K 
Sbjct: 247  ELL-EQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKG 305

Query: 747  IEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPEMLTIVVEDT 806
            + F V  + N  L    D+ R  QI+ N++ NAIKFT QG+V   +D   + +   V+DT
Sbjct: 306  VHFYVQSNKNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVLDYTKDGVVFRVKDT 365

Query: 807  GCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQI 866
            G G+ + ++E LF PF QAD++ITR +GGTGLG++I  +L+ELM G I+V+SEF  GT  
Sbjct: 366  GIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTF 425

Query: 867  QVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPDLLLNR 926
             + +PL                                                    +R
Sbjct: 426  TLYIPL---------------------------------------------------QSR 434

Query: 927  LREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEK 986
            L+ +   T +  +  + +    H+LV +D   N+++I+  L++LG   T+  +GLQA E 
Sbjct: 435  LKNIKPSTSSSQQIVNVK--NHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVEL 492

Query: 987  LSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQALQAGM 1046
            L ++   +DL++ D  MP +DG A T+ ++ +    +  ++  TA  +    +  + AGM
Sbjct: 493  LEKN-HVFDLVLMDISMPIMDGIAATKILRDK--HIEIPIIALTAHTAGSDKQNCIDAGM 549

Query: 1047 DKVIYKPYTLANLRKVLSRYL 1067
            + ++ KP    ++ +V+ R+L
Sbjct: 550  NDIVLKPIRSKDIMEVVKRFL 570