Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  179 bits (455), Expect = 6e-49
 Identities = 144/505 (28%), Positives = 238/505 (47%), Gaps = 72/505 (14%)

Query: 629  TELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSESQL 688
            + L  + Q L Q+  +AL   +AR  FLA +SHE+RTP+  MLG++ +       SE + 
Sbjct: 283  SSLSLSNQELEQARSRALDMAQARAAFLANMSHEIRTPLNGMLGMIALALDNPLPSEQRQ 342

Query: 689  LLTNAISSAERLKLHVNDILDFSKIEAQQLQLD---IGLYNLADELGPLLRGFEASAQLK 745
             L  A  S + L   +NDILD SK +A QL+L+     + ++ ++   LL   + +AQ  
Sbjct: 343  QLAIAHDSGKVLVELLNDILDLSKFDAGQLELERIAFDMGSMVEDTANLLS--QNTAQSV 400

Query: 746  EIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPEMLTIVVED 805
            E+   +     S +L   D  R  QIV+NLLSNA+KFT  GRV  ++      + + V D
Sbjct: 401  ELTCLIASDFPSSVLG--DPTRVRQIVSNLLSNALKFTRFGRVDVRLAAIVGGVRLEVRD 458

Query: 806  TGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQ 865
            TG G+ +     +F PF QA + ITR++GGTGLG+++  NL + M G + ++SE   G+ 
Sbjct: 459  TGIGIPEDAQARIFQPFTQAGAGITRQYGGTGLGLALTRNLCKAMQGHLHIRSEPGFGSC 518

Query: 866  IQVNLPLVTQT----CDEFRGQVVAMS-----------------------YRSPYMLWAK 898
                LPL   T         G+V A+S                       + S   L A 
Sbjct: 519  FTAELPLTVHTEAIPPAPLHGRVAALSAAGSGLNELLQHLLPAWGLTYQRHDSCATLVAA 578

Query: 899  ALGMRVEENEEWV-----------------------EQS-----GHNIYPDLLLNRLREV 930
             + + + ++ E +                       EQS      H +   L  N L + 
Sbjct: 579  VIDLLITDDVEHLFELRPALKTPILLVTAYGNFLPNEQSLALAPLHQLARPLARNALYQT 638

Query: 931  SNLTQAQTEPAHSRLL--------QGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQ 982
               T    EP H   +        +  +L+ +D+ +N+L+ K  L++LG    L + G +
Sbjct: 639  LRRTLQGHEPEHPLAIPAITQEQGRARILLVEDNPVNQLVAKGMLAKLGCQVQLATQGAE 698

Query: 983  AFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQAL 1042
            A E L++  E++DL++ DC+MP +DG+  +R+++Q     +  +V  TA       E+  
Sbjct: 699  ALELLAR--EEFDLVLMDCNMPVMDGYEASRRIRQSGRWPELPIVALTANAMPEERERCR 756

Query: 1043 QAGMDKVIYKPYTLANLRKVLSRYL 1067
             AGM+  + KP+    L  ++  ++
Sbjct: 757  AAGMNDYLAKPFRREELLALVDHWV 781