Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  166 bits (420), Expect = 6e-45
 Identities = 153/524 (29%), Positives = 234/524 (44%), Gaps = 71/524 (13%)

Query: 632  KETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSESQLLLT 691
            ++    L  + E A     A++ FLAV+SHE+RTP+  +LG++ +L  R   +E +  L 
Sbjct: 206  RQARITLLDAKEAAEAGTRAKSEFLAVMSHEIRTPMNGILGMVRLLLDRPLEAEDRERLE 265

Query: 692  NAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIEFDV 751
                SAE L   +++ILD SK+EA +++ +   ++ A  L  +     A A+ K +E   
Sbjct: 266  MVHHSAELLLGILDNILDLSKVEAGRMEFERSPFSPARTLAGIQTLLSARAREKGLELSH 325

Query: 752  IWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPE---MLTIVVEDTGC 808
               P        D  R  QI+ NL  NA+KFTD G V+ ++ +A +    L   V DTG 
Sbjct: 326  AIGPEVPEWVEGDGGRLRQILLNLAGNALKFTDSGHVLIRVGLAGDGSGRLEFSVTDTGI 385

Query: 809  GMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQV 868
            G+ + +I  LF  FAQADS+ITRRFGGTGLG++I   L+E   G+I V+S    G++   
Sbjct: 386  GLGEAEIGRLFHAFAQADSSITRRFGGTGLGLAICRRLVEAQGGEIGVESRPGVGSRFWF 445

Query: 869  NLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQSGHNIYPDLLLNRLR 928
             L L                        A ALG         V+  G  + P L      
Sbjct: 446  RLALPAGR--------------------APALGA--------VDARGEVVLPPL------ 471

Query: 929  EVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLS 988
                                 VLVA+D+ IN+ +    L++ G   T+ ++G +A     
Sbjct: 472  --------------------SVLVAEDNPINQKVALGFLTQAGHRVTVAANGAEAL--AL 509

Query: 989  QHPEQYDLLITDCHMPHLDGFALTRKVKQ-EISLFKGAVVGCTAEDSRLAAEQALQAGMD 1047
                 +D+++ D  MP +DG     +++          V+  TA   R  AE+  +AGM+
Sbjct: 510  ARDGGFDVVLMDMQMPVMDGLEAVSRIRALPAPAGDVPVIALTANAMRGDAERCREAGMN 569

Query: 1048 KVIYKPYTLANLRKVLSRYLTTQWV-ALPEQSWLDAYQEEER----EEMAMVVAESLAQD 1102
              + KP   A L +V+   L    V A P       + E       E M  +V+  L   
Sbjct: 570  AHVAKPVDPAILFRVIGDVLAGGPVGATPAAGQTAPFAELSAYLGPEGMTSLVSAFLTHA 629

Query: 1103 IA---LLNQPDCDVKAL---AHRIKGAAGSLQLQRLADLAKTVE 1140
             A   +L +   D+  L   AH +K  AG+     LADLA  +E
Sbjct: 630  EAACRILAEETGDLLRLHMAAHDLKSMAGTAGCASLADLAAAIE 673