Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  189 bits (481), Expect = 4e-52
 Identities = 140/454 (30%), Positives = 217/454 (47%), Gaps = 70/454 (15%)

Query: 621  YLTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASR 680
            ++T + DIT+ K  E+ L  + ++A +    + +FLA +SHE+RTP+  +LG++ +L   
Sbjct: 118  FVTTYTDITDRKRAERMLIHAKDKAEETARLKANFLATMSHEIRTPMNGVLGMLHLLTGS 177

Query: 681  LKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLD---IGLYNLADELGPLLRG 737
              + + +  L  A SSA  L   +NDILDFSK+EA Q++L+     L+ L +E+  LL+G
Sbjct: 178  PLTPDQRDHLETAQSSARALLAIINDILDFSKLEAGQMKLEATKFDLHRLLEEMVALLKG 237

Query: 738  FEASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPE 797
               +A+ K +   +  +         D  R  Q++TNL+ NA+KFT++G V   + V PE
Sbjct: 238  ---AARDKGLTLSLRIADTVPRYQAGDPTRLRQVLTNLMGNAVKFTEKGDVA--VSVEPE 292

Query: 798  -----MLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNG 852
                  L   V DTG G+      +LF  F QADS+ITRRFGGTGLG+SI   L+E+M G
Sbjct: 293  ESDSSRLRFEVADTGIGIEPAAAPALFSEFVQADSSITRRFGGTGLGLSICKRLVEMMGG 352

Query: 853  KIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVE 912
            +I   S   +GT     LPL     D+  G                             E
Sbjct: 353  EIGFDSIPGEGTTFHFTLPLSAALPDQDSGA---------------------------AE 385

Query: 913  QSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGL 972
             +G ++ P                             VL+A+D+ +N+ L    L   G 
Sbjct: 386  DAGPDLPPMA---------------------------VLLAEDNPVNQKLTTTLLDRWGQ 418

Query: 973  SATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALTRKVK-QEISLFKGAVVGCTA 1031
              TL  +G +A   +++  + +DL++ D HMP +DG   TR+++     + K  ++  TA
Sbjct: 419  RVTLARNGAEAIAAVAR--DHFDLVLMDVHMPGIDGLEATRRIRAMSGPVAKIPIIAMTA 476

Query: 1032 EDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSR 1065
            +     A   L AGMD  + KP     L   L R
Sbjct: 477  DVMDGDAALCLDAGMDDYVAKPVEPTRLLAALHR 510