Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 948 a.a., Two-component sensor protein RcsC (EC 2.7.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  153 bits (386), Expect = 7e-41
 Identities = 85/246 (34%), Positives = 146/246 (59%)

Query: 627 DITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSES 686
           D++   + E++L++  + A QA ++++ FLA VSHELRTP+  ++G +++L ++      
Sbjct: 445 DVSTRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGV 504

Query: 687 QLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKE 746
           + L+T   +S+  L   ++DILDFSKIE++QL+++   ++  + +  +   +      K+
Sbjct: 505 ERLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQ 564

Query: 747 IEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPEMLTIVVEDT 806
           +       P+  +  N D +R  Q+++NLLSNAIKFTD G +V  +    + L+I V DT
Sbjct: 565 LGLYCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDIGCIVLHVRCDGDYLSIRVRDT 624

Query: 807 GCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQI 866
           G G+   ++  LF PF Q  + + R F GTGLG++I   LI +M+G I V SE   G+Q 
Sbjct: 625 GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQF 684

Query: 867 QVNLPL 872
            + +PL
Sbjct: 685 TLRIPL 690



 Score = 74.3 bits (181), Expect = 4e-17
 Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 6/118 (5%)

Query: 950  VLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGF 1009
            +LV DD  INR L+  QL  LG      +DG+ A   LS++    D++++D +MP++DG+
Sbjct: 827  ILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKN--AIDIVLSDVNMPNMDGY 884

Query: 1010 ALTRKVKQ-EISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRY 1066
             LT++++Q  ++L    VVG TA       ++ L++GMD  + KP TL  L++ L+ Y
Sbjct: 885  RLTQRIRQLGLTL---PVVGVTANALAEEKQRCLESGMDSCLSKPVTLDVLKQTLAVY 939