Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 892 a.a., Signal transduction histidine kinase from Enterobacter asburiae PDN3

 Score =  156 bits (395), Expect = 6e-42
 Identities = 93/251 (37%), Positives = 150/251 (59%), Gaps = 2/251 (0%)

Query: 627 DITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSES 686
           DIT  KE E     + + A +A EA++ FLA +SHE+RTP+  ++G+ ++      S++ 
Sbjct: 242 DITRRKEAEILAINAAQDARKANEAKSAFLANMSHEIRTPMNGIIGMTQLCLDTALSADQ 301

Query: 687 QLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKE 746
           +  LT  +SSA+ L   +NDILDFS+IEA +++L+     +   +  L+R     A  K 
Sbjct: 302 RDYLTLVMSSAQSLLHIINDILDFSRIEAGKVELETEPVPVRPFVQSLIRPHMPGASEKG 361

Query: 747 IEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKID--VAPEMLTIVVE 804
           IE  V  +P+   +   D  R  Q++TNLL NA+KFT QG V+  ++   + +     V 
Sbjct: 362 IELLVDITPDVPDVLMGDGARLRQVLTNLLGNALKFTHQGEVILIVEPGESVDRWRFRVR 421

Query: 805 DTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGT 864
           D+G G+   + +++F  F+QAD++ TRR+GGTGLG++I A L+  M G++ V SE  +G+
Sbjct: 422 DSGIGIPADKQKAIFEAFSQADNSTTRRYGGTGLGLTISARLVAAMGGELTVSSEPGKGS 481

Query: 865 QIQVNLPLVTQ 875
           +   +LPL TQ
Sbjct: 482 EFSFSLPLATQ 492



 Score = 62.8 bits (151), Expect = 1e-13
 Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 32/229 (13%)

Query: 950  VLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGF 1009
            +L+A+D+ +N+ +  + L  LG S  +V +G+   E+       +D+L+ D  MP +DG 
Sbjct: 651  ILLAEDNLVNQKVAARLLERLGHSCQIVDNGVALLERW--RAGVWDVLLIDLQMPEMDGE 708

Query: 1010 ALTRKVKQEISLFKG---AVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRY 1066
               R +++E     G     V  TA   +   E+ L  G D  I KP +  +L + ++R 
Sbjct: 709  TAIRLLREEERSRPGPAQPTVAMTAHAMQGDKERCLNMGFDGYIAKPISQEHLAEEIAR- 767

Query: 1067 LTTQWVALPEQSWLDAYQEEER------------EEMAMVVAESLAQDIALLNQ--PDCD 1112
                   LP      A+ +E R            +E+  + +E LA+ +  + +     D
Sbjct: 768  ------VLPSHDDPSAFPDEVRLLKQCADDPDLVQELLALFSEGLAEAMKAITRAIDSND 821

Query: 1113 VKAL---AHRIKGAAGSLQLQRLADLAKTVEKQN---DPQQLVADKQQL 1155
             +AL   AH+++G A +L  + LA   + +E +    + QQL A  +QL
Sbjct: 822  REALRRAAHKLRGEAITLDFRALAQQLQALESEAHTLEGQQLAALNEQL 870



 Score = 45.8 bits (107), Expect = 2e-08
 Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 2/127 (1%)

Query: 939  EPAHSRLLQGH-VLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLL 997
            E  HS    G  VLV DD+  N  L+   LS++GL  T V++  +A  ++ +    + L+
Sbjct: 498  ERPHSDRFNGEPVLVVDDNETNLRLLAAMLSQMGLKPTCVNNASEAINRV-KAGTAWPLI 556

Query: 998  ITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLA 1057
            + D  MP +DG +L  ++     + +  ++  ++           + G+   ++KP    
Sbjct: 557  LLDAQMPDMDGVSLALELSVLPQISESHIIMLSSMSRHFDINMLKRIGIKNYLHKPIAQD 616

Query: 1058 NLRKVLS 1064
             L + ++
Sbjct: 617  ELHQAIA 623