Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1197 a.a., Sensor protein EvgS from Escherichia fergusonii Becca

 Score =  221 bits (562), Expect = 4e-61
 Identities = 291/1247 (23%), Positives = 517/1247 (41%), Gaps = 188/1247 (15%)

Query: 7    LDPNEQAYVEQKSTVTIAVLKEIWMPYWGGTGQEPI-GIEHDFASGIAKELGINIEYKGF 65
            L   E  ++  K  + IAV K           Q+ I GI  D+ + + + L I +  + +
Sbjct: 44   LSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRIRGINADYLNLLKRALNIKLTLREY 103

Query: 66   DTIEALLNAVSTGKADMAIGFGQTLAREGKFLFSKPLYENVRVIWLRDKAMEEKPFASLK 125
               +  ++A+  G+ D+ +            + S PL +++               A+  
Sbjct: 104  ADHQKAMDALEDGEVDIVLSH---------LVASPPLNDDI---------------AATN 139

Query: 126  WVCIQGTSYCEILKDRGYP-------NIIMARNYSSSVEMIRQGIADATVTNYVSL---- 174
             + I   +    L D   P       NI    NY    E+I Q    AT+ ++ +L    
Sbjct: 140  PLIITFPALVTTLHDSMRPLTSSKPVNIARVANYPPD-EVIHQSFPKATIISFTNLYQAL 198

Query: 175  -------NHYLSQKRLALGKVI---FDPDLGV--------QTNRILINNNEPLLLSAINK 216
                   N Y     +    +I   F   L V        Q N +L   +  +L   +N+
Sbjct: 199  ASVSAGQNDYFIGSNIITSSMISRYFTHSLNVVKYYNSPRQYNFLLTRKDSIVLNEVLNR 258

Query: 217  VIDA----DKQGLTENKLNSADVYFLNDQANLNILRNENVNPVVRYTIQDDLF--PMSYW 270
             +DA     +  +++N L++ ++ FLN    L     + +       + ++ +  P S  
Sbjct: 259  FVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSMT 318

Query: 271  DEKEKKYKGYVHDLLERISTKSILKFEFVP-AYGRDVEDMLRHGKVDLIPSFNMTYVDDR 329
            DE     +G + D+L  I+ ++ L F  +  ++       L  G  D++P+    Y +DR
Sbjct: 319  DETGS-VRGVMGDILNIITLQTGLNFSPITVSHNIHAGTQLNPGGWDILPA--AIYSEDR 375

Query: 330  YFIHTGRYTDIQFGYIETTRPYTTPITGILD--RTGKFNAYIAVQKNLSDVKVYRSMYDL 387
                     ++ F  +  T PY   +    D  +T K    +A+          + MY  
Sbjct: 376  E-------NNVSFAEVFITTPYVFVMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPE 428

Query: 388  EQALEKGD-------ITHGLLNKVLINQM----LLDGHQDAFKLSPLTEGQDLRADMTML 436
             + ++  +       +  G L+ ++  Q+    ++D +        L  G    A ++  
Sbjct: 429  VEWIKVDNASAAFHKVKEGELDALVATQLNSRYMIDHYYPNELYHFLIPGVQ-NASLSFA 487

Query: 437  VRKDARGLQNMLQKVLATFSQQEIDEIKGAYDRV--TVYFGYDKQKVLIYALIILCALLS 494
              +    L++++ K L      E+  +   + ++       +D      Y +  L  LL 
Sbjct: 488  FPRGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLL- 546

Query: 495  IGLILTLSLSRLRGKLRSSEQVAKLSTEQLRWLTELLDAIPSMIFISDAKGEVVLTNAAY 554
            +G  L      LR   R       L   Q+ +   L D++P+  ++ + +G V+  N+A+
Sbjct: 547  VGSSLLWGFYLLRSVRRRKVIQGDLEN-QISFRKALSDSLPNPTYVVNWQGNVISHNSAF 605

Query: 555  RKIYHTCCEKGCVQP--QPECSFL-ALPDQHEAEFSIIIQAPKSNCSIGEHYFHVT---- 607
               +     K  + P    E  F     + HE     +    K N +I    F +     
Sbjct: 606  EHYFTDDYYKNAMLPLENSESPFKDVFSNTHE-----VTAETKENRTIYTQVFEIDNGIE 660

Query: 608  RRAISH-------PINQRKYYLTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVS 660
            +R I+H       P ++   Y+  + DITE ++   AL     +A+ A  A++ FLA +S
Sbjct: 661  KRCINHWHTLCNLPASEHAVYICGWQDITETRDLIHALEVERNKAINATVAKSQFLATMS 720

Query: 661  HELRTPIAAMLGLMEILASRLKSSESQL-LLTNAISSAERLKLHVNDILDFSKIEAQQLQ 719
            HE+RTPI++++G +E+L+    S E ++  ++ A ++ + L   + +ILD  KIE+   Q
Sbjct: 721  HEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQ 780

Query: 720  LDIGLYNLADELGPLLRGFEASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNA 779
            L     ++   +      F A A  K I      +     L   D   F Q+++NLLSNA
Sbjct: 781  LQPQWVDIPTLVQNTCHSFAAIAASKSIALSCSSTLPERYLVKIDPQAFKQVLSNLLSNA 840

Query: 780  IKFTDQGRV-----VFKIDVAPEMLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFG 834
            +KFT +G V     +  ID    ++ + + D+G G++Q + + LF  ++Q  ++  R+  
Sbjct: 841  LKFTTEGAVKITTSLGHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQ--TSAGRQQT 898

Query: 835  GTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYM 894
            G+GLG+ I   LI+ M G + ++S    GT   + +P+      E   QV A+       
Sbjct: 899  GSGLGLMICKELIKNMQGDLSLESHPGIGTIFTITIPV------EITQQVAAVE------ 946

Query: 895  LWAKALGMRVEENEEWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLVAD 954
              AKA            EQ      P  L  +L                      +L+AD
Sbjct: 947  --AKA------------EQ------PITLPEKL---------------------SILIAD 965

Query: 955  DDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALTRK 1014
            D   NRLL+K+QL+ LG      +DG+QA  K+S   + YDLLITD +MP++DGF LTRK
Sbjct: 966  DHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSM--QHYDLLITDVNMPNMDGFELTRK 1023

Query: 1015 VKQEISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYLTTQWVAL 1074
            ++++ S     + G TA       E+ L  GM+  ++KP TL  L+  LS+      +A 
Sbjct: 1024 LREQNSSL--PIWGLTANAQANEREKGLNCGMNLCLFKPLTLDVLKTHLSQLHQVAHIA- 1080

Query: 1075 PEQSWLD--------AYQEEEREEMAMVVAESLAQDI-----ALLNQPDCDVKALAHRIK 1121
            P+   LD        A   +  +E+ M       +D+     AL    +       HRI 
Sbjct: 1081 PQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLPAAFHALEAGDNRTFHQCIHRIH 1140

Query: 1122 GAAGSLQLQRLADLAKTVEKQNDPQQLVADKQQLINAMHEVVEQAQQ 1168
            GAA  L LQ+L +++  +E          +  QL+N++ E + +  Q
Sbjct: 1141 GAANILNLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQ 1187