Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 954 a.a., two-component system sensor histidine kinase RcsC from Dickeya dianthicola ME23

 Score =  209 bits (532), Expect = 9e-58
 Identities = 149/501 (29%), Positives = 251/501 (50%), Gaps = 65/501 (12%)

Query: 627  DITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSES 686
            D++     E++L++    A QA ++++ FLA VSHELRTP+  ++G +++L ++L  S++
Sbjct: 446  DVSARVRMEESLQEMANAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKLLPSDA 505

Query: 687  QLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKE 746
              L+T   +S+  L   ++DILDFSKIE++QL+++   +   + +  ++  +      K 
Sbjct: 506  NRLVTAMQNSSSLLLKIISDILDFSKIESEQLKIEPSEFAPREVINHIVSNYLPLVVKKR 565

Query: 747  IEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPE-MLTIVVED 805
            +       P+       DA+R  Q+++NLLSNAIKFTD G +VF++    +  L   V D
Sbjct: 566  LVLYCYIDPDVPFRLMGDAVRLQQVLSNLLSNAIKFTDTGCIVFQVACCDDGYLVFKVRD 625

Query: 806  TGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQ 865
            TG G+    +  LF PF QA + + R F GTGLG++I   L+ LM+G I ++SE   G++
Sbjct: 626  TGVGIDTRAVMKLFDPFFQAGTGVQRHFQGTGLGLAICEKLVSLMDGDITIESELGLGSE 685

Query: 866  IQVNLPLV------TQTCDEFRGQVVAMSYRSP----YMLWAKALG----MRVEENE--- 908
              + +PL       T    + +G+   +  R+     Y+L     G     R EE +   
Sbjct: 686  FGIRIPLYRAHYPQTLPVPDLQGKTYWLQIRNALMERYLLGLLNTGGLDAQRYEEGQPVG 745

Query: 909  ------------------EWVE------------QSGHNIYPDLLLNRL----------- 927
                               WVE            ++G+ +Y    L+ L           
Sbjct: 746  RDDVMIFDHVPDTLPNAYAWVEISGMQAGAAQEIRTGYWLYSTAALHELPVLLQRIYRGE 805

Query: 928  REVSNLTQAQTEPAHSRLLQG--HVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFE 985
             E+     +    +++R   G   +LV DD  INR L+  QL  LG      +DGL A +
Sbjct: 806  DELPTAALSLPSVSYNRTENGGIRLLVVDDHPINRRLLADQLGSLGYQVVTANDGLDALD 865

Query: 986  KLSQHPEQYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQALQAG 1045
             L+++P   D+++TD +MP++DG+  T+++++        V+G TA       ++ LQAG
Sbjct: 866  VLAKNP--VDIVLTDVNMPNMDGYRFTQRLREMGQTL--PVIGVTANALAEERQRCLQAG 921

Query: 1046 MDKVIYKPYTLANLRKVLSRY 1066
            MD  + KP TL  L++ LS Y
Sbjct: 922  MDNCLSKPVTLDTLQQSLSYY 942