Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., Autoinducer 2 sensor kinase/phosphatase LuxQ from Alteromonas macleodii MIT1002

 Score =  174 bits (441), Expect = 2e-47
 Identities = 146/481 (30%), Positives = 232/481 (48%), Gaps = 73/481 (15%)

Query: 606  VTRRAISHPINQRKYYLTLFNDITELK-ETEQALRQSNEQALQAVEARNHFLAVVSHELR 664
            V  + +S  + Q     +L  D+  +  E EQ + Q    A QA  A+  FLAV+SHE+R
Sbjct: 216  VDHKKVSIDLQQNDELGSLARDVEAMSGEIEQYVAQ----AQQANRAKTDFLAVMSHEIR 271

Query: 665  TPIAAMLGLMEILASRLKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGL 724
            TP+  + GL  +L     S +     ++  SSA  L   +ND+LD SKIE+   ++D+  
Sbjct: 272  TPLNGIQGLATLLLDTHLSDKQHQYASDLKSSASILATVINDVLDLSKIESGMSEVDVTE 331

Query: 725  YNLADELGPL--LRGFEASAQLKEIEFDVIWSPNSLLLA-NFDALRFNQIVTNLLSNAIK 781
            ++L   L  L  L G  ASA    + +    S N   +A   D  +  QI+ NL+SNAIK
Sbjct: 332  FDLDAMLNDLITLLGTNASANSTRLVYK---SKNMESVAVTSDITKLRQIIINLVSNAIK 388

Query: 782  FTDQGRVVFKID--------VAPEMLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRF 833
            FT +G V             V+   L I V+DTG G+   ++E +F  F Q+DS+ITR++
Sbjct: 389  FTHKGTVTISAKLKQPSQDTVSENHLVIAVKDTGIGIEPDRLEHIFDKFTQSDSSITRKY 448

Query: 834  GGTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPY 893
            GGTGLG++I   L +++ G I+V S+  +G                           S +
Sbjct: 449  GGTGLGLAIAKQLAQILGGDIKVVSKVGEG---------------------------SCF 481

Query: 894  MLWAKALGMRVEENEEWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQG-HVLV 952
             + AK    RV E+                     +  ++ QA+     + L +G  VL+
Sbjct: 482  TVTAKVQSRRVVESS-------------------ADSGSVRQAE----RASLPEGIKVLL 518

Query: 953  ADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHMPHLDGFALT 1012
            A+D+AIN ++ +  L +L      V +GL+A  ++ +     D++  D HMP +DG   T
Sbjct: 519  AEDNAINAVVAQALLEQLKCDVEHVDNGLKAAARVEE--GGIDVVFMDVHMPVMDGIEAT 576

Query: 1013 RKV-KQEISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSRYLTTQW 1071
            +++ K +  L K  V+G TAE  +       +AGMD ++ KP T+  L++ LS+    Q 
Sbjct: 577  KRIRKLDGELSKTPVIGLTAEAFKERHVSFKEAGMDDIVTKPVTVEALQESLSKLALNQE 636

Query: 1072 V 1072
            V
Sbjct: 637  V 637