Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., Autoinducer 2 sensor kinase/phosphatase LuxQ from Alteromonas macleodii MIT1002

 Score =  207 bits (528), Expect = 2e-57
 Identities = 162/548 (29%), Positives = 268/548 (48%), Gaps = 73/548 (13%)

Query: 548  VLTNAAYRKIYHTCCEKGCVQPQPECSFLALPDQHE---AEFSIIIQAPKS-------NC 597
            ++ + A +++ H   EK  V+P+    F+   DQ     A+F+ +I+  +          
Sbjct: 197  LIWSGALKRMLHVHGEK-VVKPEDVIKFVVDEDQRNKYVAQFNQMIKTGEDFSYELEVRT 255

Query: 598  SIGEHYFHVTRRAISHPINQRKYYLTLFN---DITELKETEQALRQSNEQALQAVEARNH 654
              GE  +  +R   +HP+ +    + +     DIT+L   +  L+Q  + A  A++AR+ 
Sbjct: 256  DAGETRWLQSR---AHPVMENDRCVKVIGATVDITQLHMDKAMLQQKTDMAESALKARSE 312

Query: 655  FLAVVSHELRTPIAAMLGLMEILASRLKSSESQLLLTNAISSAERLKLHVNDILDFSKIE 714
            FLA +SHE+RTPI  + G++E L S   +S      + A+ SA+ L   VNDILDFSKI+
Sbjct: 313  FLANMSHEIRTPIHGVQGMLEALISSSLNSTQLEHASIAMKSADSLLNIVNDILDFSKID 372

Query: 715  AQQLQLDIGLYNLADELGPLLRGFEASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTN 774
            +  +  +    NLAD +   +  F   A  K IE  V            D LR  QI+ N
Sbjct: 373  SGNMSFEESPTNLADTIEEQVPMFTRLAHEKGIELSVSTKGVEGKTFIADKLRIGQILIN 432

Query: 775  LLSNAIKFTDQGRVVF-----KIDVAPEMLTIVVEDTGCGMTQTQIESLFVPFAQADSTI 829
            LL+NAIKFT +G+V       +       + ++V D+G G+++ Q + +F PF QA+++ 
Sbjct: 433  LLNNAIKFTKEGKVTVETKSTRYGKGRFRVKLIVTDSGIGISEQQQKLIFSPFVQAENST 492

Query: 830  TRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSY 889
             RR+GGTGLG+SIV+ +++   GKIEV S+   G +      +VT   D+     +A   
Sbjct: 493  QRRYGGTGLGLSIVSQIVKHYGGKIEVCSDLGVGARF-----IVTLMLDDANAGTIA--- 544

Query: 890  RSPYMLWAKALGMRVEENEEWVEQSGHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGH 949
                                  +  GHN                  A   P+   L    
Sbjct: 545  ---------------------EKACGHN------------------AVYIPSKQELSAFK 565

Query: 950  VLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLS---QHPEQYDLLITDCHMPHL 1006
             L+ +D+ IN+L+IK+QL E+G++A L  +G +A EK+    +    Y +++ DCHMP +
Sbjct: 566  ALIVEDNEINQLVIKEQLKEIGITADLAENGEEAVEKVKDALKGKSPYTIILMDCHMPVM 625

Query: 1007 DGFALTRKVKQEISLFKG-AVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVLSR 1065
            DG   T+ ++      +   ++  TA       E+ L++GMD  I KP  ++ L++ L R
Sbjct: 626  DGLEATKLIRSMGDKARDIPIIALTANALTGDKEKCLKSGMDDFISKPVGVSRLKECLYR 685

Query: 1066 YLTTQWVA 1073
            +L+ Q V+
Sbjct: 686  HLSKQLVS 693