Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 875 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score =  162 bits (410), Expect = 1e-43
 Identities = 91/254 (35%), Positives = 150/254 (59%), Gaps = 4/254 (1%)

Query: 621 YLTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASR 680
           ++ +FNDI+  K  EQ L+++ ++A  A +A++ FLA +SHE+RTP+ A++GL  +    
Sbjct: 156 HVGVFNDISGQKAIEQKLQKAYDEAQSANKAKSDFLATMSHEIRTPMNAIIGLTHLALES 215

Query: 681 LKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEA 740
             + + Q  L     S+  L   +N ILDFSK+EA ++++    + L   +  L + F+ 
Sbjct: 216 TDNEQRQQYLEKVQRSSTALLDLMNSILDFSKVEADKIEIIDEPFTLTKTIDKLAQVFQV 275

Query: 741 SAQLKEIE--FDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPEM 798
            AQ K+++  FD+    N  L    D+ +  Q++ NLLSNAIKFT  G V+  ++     
Sbjct: 276 KAQQKQLQLLFDIRCHTN--LQCRGDSEKIYQVLLNLLSNAIKFTASGHVILTVEKRENQ 333

Query: 799 LTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKIEVKS 858
           L   V DTG G+++     LF  F QAD++I+R +GGTGLG++I   L+ELM G + ++S
Sbjct: 334 LAFSVSDTGMGISEQVKSKLFKAFVQADASISREYGGTGLGLAICKRLVELMGGDLTLES 393

Query: 859 EFEQGTQIQVNLPL 872
           E ++G+     LP+
Sbjct: 394 EVDKGSCFSFALPV 407



 Score = 70.5 bits (171), Expect = 6e-16
 Identities = 38/131 (29%), Positives = 76/131 (58%), Gaps = 3/131 (2%)

Query: 944  RLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLLITDCHM 1003
            RLL  HVLV DDDAI+  + ++ LS+LG++  + S G QA         ++D ++ DC++
Sbjct: 563  RLLNKHVLVVDDDAISVEISQQILSDLGINVAVASSGEQALALCEM--SKFDAILLDCYL 620

Query: 1004 PHLDGFALTRKVKQEISLFKGAVVGCTAEDSRLAAEQALQAGMDKVIYKPYTLANLRKVL 1063
            P + G+ +  ++ Q+   +   ++  +A++S+ A+E AL AGM + + KP T   +   +
Sbjct: 621  PGVSGYEVAEQLTQKKDWYT-PIIALSADESQEASESALTAGMCQHLVKPATADEIVHTI 679

Query: 1064 SRYLTTQWVAL 1074
              ++ + ++ +
Sbjct: 680  DIHIHSGYIEI 690