Pairwise Alignments

Query, 1176 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1231 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

 Score =  169 bits (429), Expect = 1e-45
 Identities = 121/422 (28%), Positives = 205/422 (48%), Gaps = 65/422 (15%)

Query: 620  YYLTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILAS 679
            Y+L +  D+TE+K  E+ L++   +A  A  A++ FLA +SHE+RTP+  +LG+ E+LA 
Sbjct: 650  YWLIIVTDVTEMKVREEELQRLLSRAEAADRAKSEFLANMSHEIRTPMNGVLGMAELLAK 709

Query: 680  RLKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFE 739
                +  +      + S   L   +NDILDFSKIEA Q++L    ++ A+ +  ++    
Sbjct: 710  SKLDTRQKTFTDIIVKSGNALLTIINDILDFSKIEAGQMKLRSVPFDPAEAVEDVVSLLS 769

Query: 740  ASAQLKEIEFDVIWSPNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKI-----DV 794
            ++A  K+IE  V    +       DA RF QIVTN++ NA+KFT+ G V+ ++     + 
Sbjct: 770  SAALEKDIELIVRIDASVSGKVIGDAGRFRQIVTNIVGNAVKFTETGHVLVELSAQSAEA 829

Query: 795  APEMLTIVVEDTGCGMTQTQIESLFVPFAQADSTITRRFGGTGLGMSIVANLIELMNGKI 854
            +  + ++ VED+G G+   ++E++F  F+Q D + TRR  GTGLG++I   L+ L +GKI
Sbjct: 830  SESIFSLRVEDSGIGIPVDKLETIFDKFSQVDGSATRRHEGTGLGLAITVGLVGLFDGKI 889

Query: 855  EVKSEFEQGTQIQVNLPLVTQTCDEFRGQVVAMSYRSPYMLWAKALGMRVEENEEWVEQS 914
             V SE  +G+  +V++                                            
Sbjct: 890  NVVSEVGRGSAFEVDI-------------------------------------------- 905

Query: 915  GHNIYPDLLLNRLREVSNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSA 974
                 P  ++ R R+V  L+ A  +          VLV DD+ +NR ++ +QL   G+  
Sbjct: 906  -----PFQVMERRRDVPLLSVAIDDI--------RVLVIDDNDVNRRILTEQLRSWGIDG 952

Query: 975  TLVSDGLQAFEKLSQHPE---QYDLLITDCHMPHLDGFALTRKVKQEISLFKGAVVGCTA 1031
              V +G      L +        D +I D HMP ++G  +  +++ +      A+V  T+
Sbjct: 953  HAVENGPSGIAVLQEAASLGFAIDAIILDYHMPVMNGLDVVERIRADKRFDDIAIVFLTS 1012

Query: 1032 ED 1033
             D
Sbjct: 1013 MD 1014



 Score = 55.1 bits (131), Expect = 4e-11
 Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 6/134 (4%)

Query: 938  TEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQHPEQYDLL 997
            T P  SR     VLVA+D+ +N+++  + L + GL   +V +G +A +   ++     L+
Sbjct: 1088 TVPERSRPCLLDVLVAEDNDVNQIVFSQILQQAGLRFLIVGNGKRAVQAWEEYNPA--LI 1145

Query: 998  ITDCHMPHLDGFALTRKVKQEISLFKGA----VVGCTAEDSRLAAEQALQAGMDKVIYKP 1053
            + D  MP ++G   T+ ++        +    V+G TA       E+ L+AGMD  + KP
Sbjct: 1146 LMDVSMPVMNGHQATQAIRAAEQAAGDSRHVPVIGVTAHTQEADRERCLEAGMDDYLSKP 1205

Query: 1054 YTLANLRKVLSRYL 1067
             +  +L   ++++L
Sbjct: 1206 ISPESLEDKIAQWL 1219