Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  181 bits (459), Expect = 5e-50
 Identities = 126/386 (32%), Positives = 192/386 (49%), Gaps = 11/386 (2%)

Query: 3   IMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDGIS 62
           I+IVED   Q   L+    +LG  D++ A +G  AL    +   DL+  D+ MP MDG+ 
Sbjct: 6   ILIVEDHPFQHLYLQNLFSELGDFDLVCARDGEEALACLKQRDFDLVLTDLLMPGMDGVQ 65

Query: 63  LLSQLSLQAPKLGVVILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEGFQ 122
            +  L+ Q  +  + I+SA    +L     + S      +  + KP     L+ + +  Q
Sbjct: 66  FIQGLAAQPSRPALAIMSAASRRMLMGASLVASNLQVKVIGLISKPVNAAALRCLTDQLQ 125

Query: 123 --KQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTH 180
             +Q  P    +P I   C  +  A ++  +  ++QP+    +G +V  EALVR+ HP H
Sbjct: 126 ALRQVAP-AEIQPGID--CQSLMNALVNGDLQAWFQPKKALSNGRIVAAEALVRWAHPEH 182

Query: 181 GMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASI---GADLQLSVNISQRNLQ-HSIC 236
           G+L P VFLP +  C L E+L   VL+++++A A+    G D+ +S+N+    L  H + 
Sbjct: 183 GLLLPGVFLPALIACNLEERLLWCVLKQAMAAQATWRQQGYDIPVSINLPTHLLNSHDLP 242

Query: 237 DPILA-ICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASL 295
           D I A + E  G PA ++  E+ E  V +      A   RLR+ G GLS DDFG GY+S 
Sbjct: 243 DRIQAFVLEHQGLPA-RICFELMECSVPDDISNFYAGACRLRIKGFGLSQDDFGKGYSSY 301

Query: 296 GQLAQLPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLR 355
             L   PFTELKIDR+ V     N +  Q     + L + LGL  V EGVE  +    LR
Sbjct: 302 MNLVSAPFTELKIDRALVQGCNANEELAQALTSIVSLGRQLGLIVVAEGVETAQELALLR 361

Query: 356 QLGVDTCQGYYAAKPMPIAQLSELYT 381
           ++     QG+  +  +   Q  +L T
Sbjct: 362 KIDCTQVQGFLISHAVSADQFQQLLT 387