Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  145 bits (367), Expect = 4e-39
 Identities = 84/240 (35%), Positives = 133/240 (55%), Gaps = 5/240 (2%)

Query: 142 IEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTHGMLSPAVFLPLIEQCGLHEKL 201
           + QA   + +  +YQP+    SGA+ GVEALVR+  P  G++ P  F+PL E+  L   +
Sbjct: 414 LRQAIPQNQLELHYQPKIASASGALAGVEALVRWRRPGEGLVQPDEFIPLAEESDLIVAV 473

Query: 202 FLTVLEKSVSALASIGA----DLQLSVNISQRNLQHSI-CDPILAICERYGFPASKLTLE 256
              VL ++   +    A    ++ ++VN+S R+  H    D I  I ++ G     + +E
Sbjct: 474 GEWVLNEACRQIRDWEARGFGEVAVAVNLSPRHFLHEKDVDGIFRIVDQSGVRPDLIEVE 533

Query: 257 MTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQLPFTELKIDRSFVHDL 316
           +TE    +     +  L RLR  G G++IDDFG+GY+SL  L +LP T LKIDR+FV D+
Sbjct: 534 VTESTFMHEPEKVIGYLNRLRDRGFGIAIDDFGSGYSSLSYLRRLPITTLKIDRAFVMDI 593

Query: 317 ATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVDTCQGYYAAKPMPIAQL 376
             N  + ++    + +A ++GL  + EGVEN   +++LR       QGYY ++P+P A L
Sbjct: 594 EHNADNAEIIRAIIAMANAMGLGLIAEGVENRHQFEFLRHADCGVVQGYYFSRPLPPADL 653