Pairwise Alignments

Query, 584 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., Bacteriophytochrome cph2 from Alteromonas macleodii MIT1002

 Score =  154 bits (388), Expect = 8e-42
 Identities = 96/339 (28%), Positives = 163/339 (48%), Gaps = 15/339 (4%)

Query: 52  DIRMPQMDGISLLSQLSLQAPKLGVVILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEV 111
           D++MP MDG+ +L  L+    K  ++++S  +  ++ +   +    G    + L KP   
Sbjct: 52  DLQMPDMDGVEVLRHLAAMGCKAKIILISGFDPRVVTVAAKLGVEQGLTICEALSKPLPA 111

Query: 112 EDLQRVVEGFQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEA 171
            +L+ ++          T ++     + D +  A  +   F   QP+   R   + G EA
Sbjct: 112 RELKAIL----------TKYRSMFDCSPDALRTALQNQEFFLKLQPKLALRERVISGFEA 161

Query: 172 LVRYEHPTHGMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGAD----LQLSVNIS 227
           L+R+ HP  G + P  F+P  E+  L + L   V+E S  ++  I A     +Q SVNIS
Sbjct: 162 LLRWNHPQFGEILPNKFIPEFEKHNLFKLLSDYVVEHSCISVKKIDASGCVPIQTSVNIS 221

Query: 228 QRNLQH-SICDPILAICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSID 286
             +L    + + +  IC        ++TLE+TE        T++ NL RLR+ G  LS+D
Sbjct: 222 AGDLSDLELANRLKRICSSNFVDPRQITLEITETVAMADPVTAMDNLTRLRLAGFKLSLD 281

Query: 287 DFGTGYASLGQLAQLPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVE 346
           DFGTG++SL  L  +PF E+KID  FV +   +   Q +      L ++  +  V EG E
Sbjct: 282 DFGTGFSSLAFLRNMPFNEIKIDMLFVREALRSKSDQTIIKAINSLGKAFNMSVVAEGCE 341

Query: 347 NEETWQYLRQLGVDTCQGYYAAKPMPIAQLSELYTKNRR 385
           + ET   L +L  D  QG++ ++P+ +    E    + +
Sbjct: 342 DAETLDLLEKLECDFAQGFHISRPLTVDDAIEFLNSHSK 380