Pairwise Alignments

Query, 553 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., chemotaxis regulatory protein CheY from Alteromonas macleodii MIT1002

 Score =  108 bits (271), Expect = 4e-28
 Identities = 86/359 (23%), Positives = 163/359 (45%), Gaps = 5/359 (1%)

Query: 8   ELKVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNFGK 67
           EL VL+ID+  +V   + S L ++G    N+  + +   A  +   +++D  +  +N   
Sbjct: 13  ELHVLVIDNQGLVHDVVSSALHEIGIK--NVSSAFNAFHAKRLCAARQYDFVLLAFNVSH 70

Query: 68  GLNGKQVFEELKHYKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQERL 127
             +G  +FEELKH   I      + ++ E S  +V+ I+EL+PD++ +KP     ++ RL
Sbjct: 71  DKDGFHLFEELKHLNHINDTTTVIFLSAETSPELVNCIVELQPDDFWVKPLQRNKIELRL 130

Query: 128 TNAISRKHALKALYQAERDGDAELGLSLCDE--LEPFYNDYYFVIQKFRGEFLTQLRRFD 185
              I  +  L  +    + GD    +   +    +P  ++Y+  I++  G+ L QLR + 
Sbjct: 131 EYLIQIRLKLHKMLHCMQVGDYSTAMYYAERQLKDPSLSEYHTRIKRLIGDCLLQLRDYQ 190

Query: 186 HAREVYLETLEHKDFDWAKIGLANALKQTGRQVEATQVIQELLASAPNNVRARVEAASIS 245
            A + +   L+  D  W  IGL  +L +     EA  ++ +LL             A   
Sbjct: 191 TAEDYFRSLLQSMDHAWVHIGLTRSLLRQDELEEAQLLVDDLLQRHDTRFLTFDLLAQYF 250

Query: 246 LCNNSIPEAIHHLQVANQIVPGHSEREWVLANLCLSVGDGASALERYRLYVEINKETYRN 305
           +       A   ++ A+++ P + ER   L +L     D A  L   +   +  K +  +
Sbjct: 251 IEKEQFDIAYEQMKEASKLAPRNIERNKRLWDLARLNHDKAGQLSAVQNMAKFAKNSIHD 310

Query: 306 NHQMHLNFIRTLLYAARQAESEQRDLWVQEAKSILKGL-YDKGQHEDLLAQLELVAAHL 363
           +  + LN IR+ +  A    S + + +++ A+S L+ L   KG    L  Q+++V A +
Sbjct: 311 SPHLTLNVIRSTIDLATSLGSTEGERYMKRAESELEELKQQKGMQSQLGEQIDVVKARV 369