Pairwise Alignments

Query, 553 a.a., response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., DNA-binding transcriptional regulator BasR from Alteromonas macleodii MIT1002

 Score =  126 bits (316), Expect = 2e-33
 Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 4/356 (1%)

Query: 10  KVLIIDDAPIVIASLRSMLLKLGFTEPNIVWSKSPRAAVFMAGRQRFDIFICDYNFGKGL 69
           K+LI +D  +  + +   L +LGF   N V    P  A+       +D  IC YN     
Sbjct: 10  KLLIAEDQVLAKSHMHYALEQLGFKNMNYV--DRPSHALSALQEHDYDAIICSYNLRTEQ 67

Query: 70  NGKQVFEELKHYKLIKQDAVFVLVTGENSAYVVHSILELKPDEYILKPFNIMTLQERLTN 129
            G  + E+L   + +   + F+  + + SA VVH+I+EL+PDE+I KPF++  L  RL+ 
Sbjct: 68  GGYFLLEQLNETQSLPLTSAFIFTSADTSAEVVHAIIELQPDEFIAKPFSVNELDRRLSR 127

Query: 130 AISRKHALKALYQAERDGDAELGLSLCD--ELEPFYNDYYFVIQKFRGEFLTQLRRFDHA 187
            +SRK ALK +Y      D E  L+  +   L+P   +++ +  K +G+ L    RF  A
Sbjct: 128 VLSRKKALKNIYSFIDKKDYEKALAEVEFFLLQPEQAEHFPLAMKIKGDLLIITERFQEA 187

Query: 188 REVYLETLEHKDFDWAKIGLANALKQTGRQVEATQVIQELLASAPNNVRARVEAASISLC 247
              +   +  +DF WAK+G+A +L       +A + + +L     + + A    A + + 
Sbjct: 188 VAFFESIINVQDFSWAKMGIAKSLLALNELDDAEREVIQLAMRPDSALEAYDLLAKLQIK 247

Query: 248 NNSIPEAIHHLQVANQIVPGHSEREWVLANLCLSVGDGASALERYRLYVEINKETYRNNH 307
            ++  +A+    +A  I P +  R  +  NL     D  S     +  V   K++  +  
Sbjct: 248 QSAFDDALECTSLACNISPQNIARHKLAINLARITHDYESQFNSAKKVVRYAKDSIHDKP 307

Query: 308 QMHLNFIRTLLYAARQAESEQRDLWVQEAKSILKGLYDKGQHEDLLAQLELVAAHL 363
            ++L   R  +  A  +E E  +  V++    L+ L        L  +L ++ A L
Sbjct: 308 DIYLTAARAGVDFAMTSEPEHVNSIVKQTNEYLRQLKKAHPKAALNDELTVIDARL 363