Pairwise Alignments

Query, 587 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 58.2 bits (139), Expect = 9e-13
 Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 20/224 (8%)

Query: 68  LLHRELEPLKEQLAAKRVQIGKYERALAILDNDEVAFAKLLKKTSGATVQEGRLHIQLTY 127
           LLH  L  L +++   R  I              +A A L    +  T  EG     LTY
Sbjct: 20  LLHAMLSSLLQKIGFNRRLI-------------HLALAALPFAAAAQTPVEGGT---LTY 63

Query: 128 KRPFEP--LLPHLPQRSSERFLIRQIYSCLVSSDANGHVHPELAHHWHYDPHTWQWTFYL 185
               EP  L+  L  ++  R +  ++   L+  DA     P LA  W   P   +++F L
Sbjct: 64  AVSQEPTSLVSFLDTKTDNRNVSAKVTEGLLRYDAKFTPQPLLATAWQVSPDGLKYSFKL 123

Query: 186 RPELTFHNGAPLDANTI-VSLFAKLSSLETHRAELAHISDIKAPTPFQVVFNLERPDPGF 244
           RP + FH+G    A  +  S+  +       R  LA++  +  P P   V  L RP P  
Sbjct: 124 RPGVKFHDGHDFTAEDVRYSVLTQKKQGPRGRITLANVERVDTPDPLTAVIVLSRPAPFL 183

Query: 245 AGMISGVKYAIQPVSQLNYSQ-FHEGQIVPVIGCGPFEVQEHTR 287
              +S  +  I P  + +  +      I   +G GPF  ++  R
Sbjct: 184 LKSLSSAELPIVPAHRYSDGEPLGNPNITAPVGTGPFVFEQWVR 227