Pairwise Alignments

Query, 587 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 52.8 bits (125), Expect = 4e-11
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 11/244 (4%)

Query: 133 PLLPHLPQRSSERFLIR-QIYSCLVSSDANGHVHPELAHHWHYDPHTWQWTFYLRPELTF 191
           P L  L   ++  FL+  +    L+S D +    P+LA  W   P   Q+TF LR  + +
Sbjct: 63  PTLVGLVNSAAGTFLVSPKTVEGLLSYDFDLRPRPQLAVAWEVQPDGLQYTFRLRRGVKW 122

Query: 192 HNGAPL-DANTIVSLFAKLSSLETHRAELAHISDIKAPTPFQVVFNLERPDPGFAGMISG 250
           H+G     A+   S+ A  +S    RA  A +S+++ P     V  L +P P     ++ 
Sbjct: 123 HDGRDFSSADVAFSILALKASHPRGRATFASVSEVRTPDAHTAVLVLSKPAPFLLTALAA 182

Query: 251 VKYAIQP--VSQLNYSQFHEGQIVPVIGCGPFEVQEHTRNKLKLKAFSQFY--GCRALTD 306
            +  I P  V +      H     P IG GPF  +E  R    +   +  Y    +   D
Sbjct: 183 AESPIVPRHVYEGKDLASHPANQAP-IGTGPFVFKEWVRGSHVIYERNPNYWDPGKPYID 241

Query: 307 RVTIWQVDEERLSRPLIETNQPEANTTSHHQV----SLSDSPHLTSAAQQQSRVEDGCLM 362
           R+ +  + ++  +   +E+   +    +   +     L D PHL+   +      +    
Sbjct: 242 RLVVRFIPDQAAAAAALESGTVDLAGATPVPIPDLDRLKDVPHLSLDTRGNEYFNNSTTR 301

Query: 363 VLFN 366
           + FN
Sbjct: 302 IEFN 305