Pairwise Alignments

Query, 587 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 40/193 (20%), Positives = 87/193 (45%), Gaps = 11/193 (5%)

Query: 123 IQLTYKRPFEPLLPHLPQRSSERFLIRQIYSCLVSSDANGHVHPELAHHWH-YDPHTWQW 181
           + + +  P   + P L   + +R L    +  +++S   G + P LA  W   D  TW+ 
Sbjct: 24  LSIGFADPVSSVDPELNNHAGDRSLALHFWDSIINSRDGGKLEPALASSWKALDDKTWE- 82

Query: 182 TFYLRPELTFHNGAPLDANTIVSLFAKL----SSLETHRAELAHISDIKAPTPFQVVFNL 237
            F LR ++ + +G P  A+ IV  F +      S+ ++   L  +  + A  P  ++   
Sbjct: 83  -FKLRTDIKWQDGTPFSADDIVFSFQRSRNVPGSVASYSGALRTVESVTAKDPATLIVKT 141

Query: 238 ERPDPGFAGMISGVKYAIQPVSQLNYSQ-FHEGQIVPVIGCGPFEVQEHT-RNKLKLKAF 295
             P+P     I+ +    + V + + ++ ++ G+   V+G GP++   +   ++   +  
Sbjct: 142 NTPNPMLPLEIASIYIVSKHVGEKSKTEDYNAGR--AVVGTGPYKFVSYVPGDRTVFERN 199

Query: 296 SQFYGCRALTDRV 308
             +YG + L ++V
Sbjct: 200 PGYYGPKPLWEKV 212