Pairwise Alignments

Query, 587 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  130 bits (327), Expect = 1e-34
 Identities = 143/582 (24%), Positives = 225/582 (38%), Gaps = 54/582 (9%)

Query: 17  GVGHDIKTTLPELAERLFTSPRHARNLLVRLNQLGWLTWTPKAGRHHRSSLLLHRELEPL 76
           G G   +  + E+A     S R+ R  L +++Q  WL W P+ GR  RS L L    E L
Sbjct: 16  GAGQTHELQMQEIAAIFGCSVRNCRIALKKMHQEKWLDWQPQRGRGKRSRLHLLTSPEKL 75

Query: 77  KEQLAAKRVQIGKYERALAILDNDEVAFAKLLKKTSGATVQEGRLHIQLTYKRPFEPLLP 136
             Q   K ++   Y   L  + ND+    +L     G   +     +++ Y R  +PL P
Sbjct: 76  FSQNVNKLLEKQDYGNVLRFIGNDKYLLDRLSLWRFGVQDKSSETRVRIPYYRNLDPLNP 135

Query: 137 HLPQRSSERFLIRQIYSCLVSSDA-NGHVHPELAHHWHYDPHTWQWTFYLRPELTFHNGA 195
            +P R +ER L+RQ  S L   DA  G + P++AH+W ++    +W F+L+    F +G 
Sbjct: 136 LVPLRRTERHLLRQCLSGLTRYDAVQGRIVPDIAHYWTHNEDFTRWEFWLKSTARFADGC 195

Query: 196 PLDANTIVSLFAKLSSLETHRAELAHISDIKAPTPFQVVFNLERPDPGFAGMISGVKYAI 255
            LDA+ +       S         + I  I A  P+ +V     P      ++     A 
Sbjct: 196 ELDASAVQRCLLAASQSPQFAPIFSPIKTITADAPWHLVIETHHPVRRLDCLL-----AT 250

Query: 256 QPVSQLNYSQFHEGQIVPVIGC-GPFEVQEHTRNKLKLKAFSQFYGCRALTDRVTIWQVD 314
           QP    +Y   H       I C G F +QEH+ N + L+    ++  R   D +TI+   
Sbjct: 251 QPTMLFDYQHGH-------IRCTGAFHLQEHSDNFMVLRRNQHWHQARPGLDEITIFTWA 303

Query: 315 EERLSRPLIETNQPEANTTSHHQVSLSDSPHLTSAAQQQSRVEDGCLMVLFNQRAKQPLD 374
            E +S   I   + E          + D   L   + +QS     C  VL +       D
Sbjct: 304 PEHISMSFIPLLRGE---------EVQDDRPLNERSLEQS-----CCFVLLDGDGAF-AD 348

Query: 375 QAQAHRLSELLNPNTIEQDIRCHGEMFGV-EPAHNLLPSWR---AVLKSPAPKVALPTQL 430
           +A    ++ LL P  +    +   E   +   A  +LP W               L   +
Sbjct: 349 EAGRRFINYLLQPVELLSQTQLPDEYARILSVAQGMLPQWNHRPVDFGGITAPFNLRQPV 408

Query: 431 TLALYNYTALQTCAQAIARLLAAQGITLSIHTYTYRELNQRALKGELDETLVLTNINLDD 490
            ++ +    L   A AI RLL    I   I    +   N + L+   D  + L+N  L D
Sbjct: 409 IISTFQQPELVELAGAIRRLLERWHIRAEIRIDAFDHFNNQ-LRPPAD--IWLSNFML-D 464

Query: 491 NRHASAFAMLFSNPILHACASQDEVIWLMQQLNAVREQAQLPQYL--DQLEPIASL---- 544
                AF    ++  L     + +     Q LNA+     LP  L  D  +  A++    
Sbjct: 465 TLSVPAFLEWLASTALFTRLPESQ----RQNLNAL-----LPTILNSDDEQAFATIAAFF 515

Query: 545 --LVSESWLAPLFHHRQTLRFHGVLHDVALTNWGWPDIRNVW 584
             +  + ++ PL HH              L   GWPD   +W
Sbjct: 516 HEMTHQRYVIPLLHHWMEFATEKSFTWRDLNTLGWPDFSQLW 557