Pairwise Alignments

Query, 587 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., ABC-type uncharacterized transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  217 bits (552), Expect = 1e-60
 Identities = 165/588 (28%), Positives = 273/588 (46%), Gaps = 53/588 (9%)

Query: 6   LLRYYARLTPLGVGHDIKTTLPELAERLFTSPRHARNLLVRLNQLGWLTWTPKAGRHHRS 65
           L + + RL     G   +TTL ELA+ L  S RH R LL  + Q GWL+W  +AGR  RS
Sbjct: 6   LQQQFIRLWQCCEGQSQETTLNELADLLSCSRRHMRTLLNTMQQQGWLSWEAEAGRGKRS 65

Query: 66  SLLLHRELEPLKEQLAAKRVQIGKYERALAILDNDEVAFAKLLKKTSGATVQEGRLHIQL 125
            L        L++Q A   ++  + ++ L  L  D+ A  ++L    G + ++GR  +++
Sbjct: 66  RLTFLYTGLALQQQRAEDLLEQDRIDQ-LVQLVGDKAAVRQMLVSHLGRSFRQGRHILRV 124

Query: 126 TYKRPFEPLLPHLPQRSSERFLIRQIYSCLVS-SDANGHVHPELAHHW-HYDPHTWQWTF 183
            Y RP + LLP    R SE  + RQI+S L   ++ NG +  ++AHHW    P    W F
Sbjct: 125 LYYRPMKNLLPGTALRRSETHMARQIFSGLTRINEENGELEADIAHHWQQLSPR--HWRF 182

Query: 184 YLRPELTFHNGAPLDANTIVSLFAKLSSLETHRAELAHISDIKAPTPFQVVFNLERPDPG 243
           +LRP + FH+G  L+ + +++   +   L  +    +HIS + +PT + +   L + D  
Sbjct: 183 FLRPGIHFHHGRELEMHDVIASLERARKLPLY----SHISRVHSPTAWTLDIELSQQDKW 238

Query: 244 FAGMISGVKYAIQPVSQLNYSQFHEGQIVPVIGCGPFEVQEHTRNKLKLKAFSQFYGCRA 303
              ++  V   I P    + + F     +P IG GP+ V  +  N+LK++AF  ++G RA
Sbjct: 239 LPWLLGYVPSMILPGEWESMNNFAS---LP-IGTGPYSVSRNNSNQLKIRAFDDYFGYRA 294

Query: 304 LTDRVTIWQVDEERLSRPLIETNQPEANTTSHHQVSLSDSPHLTSAAQQQSRVEDGCLMV 363
           L D V +W + +  L+  L      E  TT    V              +SR+E+GC  +
Sbjct: 295 LIDEVNVWVLPD--LNEDLSCGLTLEGPTTGEKAV--------------ESRLEEGCYYL 338

Query: 364 LFNQRAKQPLDQAQAHRLSELLNPNTIEQDIRCHGEMFGVEPAHNLLPSWRAVLKSPAPK 423
           LF++R  +  +QA    +S +L+P+ +        + +   PA+ LLP W         K
Sbjct: 339 LFDRRTHRGANQAVRKWISHVLSPSNLIYHAEEQYQTYWF-PAYGLLPRWHHARPVHCDK 397

Query: 424 VALPTQLTLALY-NYTALQTCAQAIARLLAAQGITLSIHTYTYRELNQRALKGELDETLV 482
            A    +TL  Y  +   +  A+ + RLLAA+G+ L +    Y E +Q    GE+   + 
Sbjct: 398 PAGLESITLTYYREHVEHRFIARIMTRLLAAEGVRLEVREVDYDEWHQ----GEIASDIW 453

Query: 483 LTNINLDDNRHASAFAMLFSNPILHACA----SQDEVIWLMQQLNAVREQAQLPQYLDQL 538
           L + N       S F+ L+  P++  C      QD  +W   ++N              L
Sbjct: 454 LNSANFTLPLDFSLFSHLYEVPLIQHCIDRDWQQDAALWRAGEMN--------------L 499

Query: 539 EPIASLLVSESWLAPLFHHRQTLRFHGVLHDVALTNWGWPDIRNVWSA 586
                 L++E  + PL HH   ++    +  + +   GW D ++ W A
Sbjct: 500 AAWCQQLLAEQAIVPLIHHWLMIQGQRSMRGLRMNTLGWFDFKSAWFA 547