Pairwise Alignments

Query, 587 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., HTH-type transcriptional regulator SgrR from Dickeya dianthicola ME23

 Score =  236 bits (601), Expect = 2e-66
 Identities = 181/593 (30%), Positives = 281/593 (47%), Gaps = 51/593 (8%)

Query: 1   MSDLNLLRYYARLTPLGVGHDIKTTLPELAERLFTSPRHARNLLVRLNQLGWLTWTPKAG 60
           MS   L + + RL     G D  TTL ELA  L  S RH R+LL  + Q GWLTW  +AG
Sbjct: 1   MSSPRLQQQFIRLWQCLQGQDTNTTLQELALLLNCSRRHIRSLLNAMQQQGWLTWQAEAG 60

Query: 61  RHHRSSLLLHRELEPLKEQLAAKRVQIGKYERALAILDNDEVAFAKLLKKTSGATVQEGR 120
           R  RS L        L++Q A   ++  + ++ + ++ + E     LL    G +V++GR
Sbjct: 61  RGKRSRLGFLYTGLTLQQQRAEDLLEQDRIDQLVQLVGDKETVRQMLLSHL-GRSVRQGR 119

Query: 121 LHIQLTYKRPFEPLLPHLPQRSSERFLIRQIYSCLVS-SDANGHVHPELAHHWHYDPHTW 179
             +++ Y RP   LLP    R SE  + RQI+S L S ++ NG + P++AHHW       
Sbjct: 120 HLLRILYYRPMHNLLPGSALRRSETHIARQIFSGLTSLNEENGELLPDIAHHWQ-ALSPL 178

Query: 180 QWTFYLRPELTFHNGAPLDANTIVSLFAKLSSLETHRAELAHISDIKAPTPFQVVFNLER 239
            W FYLRP + FH+G  L    +++  ++L++L       +H++DI +PTPF +   L  
Sbjct: 179 HWRFYLRPAIRFHHGRELTLEDVIASLSRLTALPL----FSHLTDISSPTPFVLDIRLSM 234

Query: 240 PDPGFAGMISGVKYAIQPVSQLNYSQFHEGQIVPVIGCGPFEVQEHTRNKLKLKAFSQFY 299
           PD     ++  V   I P        F    +   IG GP++V  ++ N+LK+ AF  ++
Sbjct: 235 PDDWLPWLLGSVPAMILPKEWQTLPDF----MRQPIGTGPYQVVRNSPNQLKINAFDDYF 290

Query: 300 GCRALTDRVTIWQVDEERLSRPLIETNQPEANTTSHHQVSLSDSPHLTSAAQQQSRVEDG 359
           G RAL D V+IW + +  +      T Q +  T +                + ++R+E+G
Sbjct: 291 GYRALIDEVSIWVLPDAPIIPACTVTLQGDDTTDN----------------ELENRLEEG 334

Query: 360 CLMVLFNQRAKQPLDQAQAHRLSELLNPNTIEQDIRCHGEMFGVEPAHNLLPSW-----R 414
           C  +LF++R+ Q  D    H L ++L+P  +   +          PA+ LLP W     R
Sbjct: 335 CYFLLFDRRSPQMADPDIRHWLCQVLSPVAM-LGLADTPYQSDWSPAYGLLPRWHHSPPR 393

Query: 415 AVLKSPAPKVALPTQLTLALY-NYTALQTCAQAIARLLAAQGITLSIHTYTYRELNQRAL 473
           AV + P   V L T LTL  Y ++      +  + RLLA+ G+TL++ +  + +  +   
Sbjct: 394 AVREKP---VGL-THLTLTGYRDHPEYAVISSIMGRLLASHGVTLTLRSLEFDDWRE--- 446

Query: 474 KGELDETLVLTNINLDDNRHASAFAMLFSNPILHACASQDEVIWLMQQLNAVREQAQLPQ 533
            G     L L + N       S FAML+  P+L  C   DE+    +Q      Q +L  
Sbjct: 447 -GSDASDLWLGSANFYLPLEFSLFAMLYELPLLRHCLGDDELEHTARQW----RQGEL-- 499

Query: 534 YLDQLEPIASLLVSESWLAPLFHHRQTLRFHGVLHDVALTNWGWPDIRNVWSA 586
               L      LVS   L PLFHH   L+    +  + +   GW D ++ W A
Sbjct: 500 ---SLAEWCQSLVSRQQLHPLFHHWLRLQGQANMRGLRMNTLGWFDFKSAWFA 549