Pairwise Alignments

Query, 587 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 52.0 bits (123), Expect = 6e-11
 Identities = 71/317 (22%), Positives = 124/317 (39%), Gaps = 31/317 (9%)

Query: 136 PHLPQRSSERFLIRQIYSCLVSSDANGHVHPELAHHWHYDPHTWQWTFYLRPELTFHNGA 195
           PH  +   E  LI   +  LVS   +G V P LA  W  +     WTF+LRP L + +G+
Sbjct: 52  PHKVESDVEGNLIHDFFEKLVSVRDDGTVMPGLADRWE-NKDNQVWTFHLRPGLKWSDGS 110

Query: 196 PLDANTIVSLFAKLSSLETHRAELAHISD--------------------IKAPTPFQVVF 235
           P+ A+ +V  + +L+  +T     ++I                      IKA     V  
Sbjct: 111 PITADDVVFSWQRLADPKTLSPYQSYIGSLHVLNAGDIIAGKKSPQELGIKALDKQTVQV 170

Query: 236 NLERPDPGFAGMISGVKYAIQPVSQLNYSQFHEGQIVPVIGCGPFEVQEHTRN-KLKLKA 294
            L++P   F  M+        P + +        Q    +G GPF   E   N ++  K 
Sbjct: 171 TLDQPLSYFLPMVDHYVMITIPKAAIEKFGDKWTQTANFVGSGPFVPTEWVVNERITAKR 230

Query: 295 FSQFY-GCRALTDRVTIWQVDEERLSRPLIETNQPEANTTSHHQVSLSDSPHLTSAAQQQ 353
              ++     + ++VT   +          +  + +A  T  +Q+  S    L +  +  
Sbjct: 231 NPNYWDNAHTVLNKVTYLAIVSNTAEVNRYKAGEVDATYTMPNQLFKSLKQELPNEVKVT 290

Query: 354 SRVEDGCLMVLFNQRAKQPLDQAQAHRLSEL-LNPNTIEQDIRCHGEMFGVEPAHNLLPS 412
             +     +  FN + K P + ++  R  +L L+ + I   +   G++    PA+N +P 
Sbjct: 291 PYL--STYIYRFNTQ-KPPFNDSRVRRALDLALDKSVIADKVLGQGQV----PAYNYVPR 343

Query: 413 WRAVLKSPAPKVALPTQ 429
             A   S  P+ A  TQ
Sbjct: 344 GMAGYASYQPEWAGWTQ 360