Pairwise Alignments

Query, 587 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., TIGR04028 family ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score = 59.3 bits (142), Expect = 4e-13
 Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 18/211 (8%)

Query: 93  ALAILDNDEVAFAKLLKKTSGATVQEGRLHIQLTYKRPFEPLLPHLPQRSSERFLIRQIY 152
           +LA+L N   A A      +G T+    ++++   ++P   L P          ++ QI 
Sbjct: 18  SLALLGNSAQALAADASPKTGGTL----IYLE---QQPHTNLYPPAGGFYPNGGILNQIT 70

Query: 153 SCLVSSDANG-HVHPELAHHWHYDPHTWQWTFYLRPELTFHNGAPLDANTIVSLFAK--L 209
             L   +     + P +A  W  +  + ++TF LRP +TF +G PLDAN +   F    L
Sbjct: 71  DKLTYQNPGTLEIEPWIAESWTINADSTEYTFTLRPGVTFSDGTPLDANAVAKNFDTYGL 130

Query: 210 SSLETHRAELAHISDI---KAPTPFQVVFNLERPDPGFAGMISGVKYAIQPVSQL--NYS 264
            + E ++     I++    +   P  V F  ++P PGF    + +   +  +S L  N++
Sbjct: 131 GNKELNQPVSEVINNYLRSEVIDPLTVKFYFKKPSPGFLQGTAAIGSGLVSLSTLARNFN 190

Query: 265 QFHEGQIVPVIGCGPFEV-QEHTRNKLKLKA 294
           Q   G    +IG GPF V  E    +LKL A
Sbjct: 191 QL--GDATRIIGSGPFVVSSEKPGRELKLAA 219