Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  261 bits (668), Expect = 5e-74
 Identities = 146/346 (42%), Positives = 222/346 (64%), Gaps = 2/346 (0%)

Query: 249 LLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVN 308
           L+    L+V   +   IA+ +   V  L   A     GDLT+R+     DE   IA   N
Sbjct: 367 LIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQ--GEGDLTRRLTSDRADELGAIANGFN 424

Query: 309 RIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVH 368
             +   Q +I+    SV  ++ ++E  A +A++T Q + +Q  +  Q+A A+H+ TAT  
Sbjct: 425 TFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQ 484

Query: 369 EVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGS 428
           +VA++A  AA+A+  A+QAA QG ++V +    I  L+ ++ K ++ +Q LAKDSE+I +
Sbjct: 485 DVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINA 544

Query: 429 VVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQR 488
           ++  I+ I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ++T++I   +Q+
Sbjct: 545 ILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQ 604

Query: 489 LQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAV 548
           LQQ +RD   ++E   S   ++V+ A  A  AL  IT  V  I+ MNTQIA+A+EEQSAV
Sbjct: 605 LQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAV 664

Query: 549 TEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
            E+IN+N+I I +++N+ A GA +SS A+ +L +LAE  ++ + ++
Sbjct: 665 AEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQF 710