Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  261 bits (668), Expect = 5e-74
 Identities = 162/442 (36%), Positives = 258/442 (58%), Gaps = 13/442 (2%)

Query: 165 EKAVIQTLKEKLDQVTR-QGFEPALQQLKAEKYDAANLILLQVINPLYNEIKKAAEAFLD 223
           E+  +  +   + ++T  QG  PA  Q   E+  + +L   +     Y + + AA A L 
Sbjct: 196 EQPALDAIDNAVKKITELQGQLPAQYQANLEEA-STSLQAYRAAVSQYRDSQTAAAAALK 254

Query: 224 IQTQEGKNNFSASQH-EINQFI----------WMVSLLGAFALIVTTSLALLIAKRVNNA 272
           I + +G      S    ++Q +           ++ L    ALI     A  I +++   
Sbjct: 255 IMSAQGDTLLGHSDKLTLSQTVVRDADAAHAKQLLLLATVLALIFGLVAAWAITRQIVIP 314

Query: 273 VHHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAA 332
           ++     A  +A+GDL+  +     DE   + + +  +    +E+I      V+ +A+AA
Sbjct: 315 LNQTLQVAQRVASGDLSHNLTSMRQDELGQLQRAMQSMTVGLRELIGGISDGVTQIASAA 374

Query: 333 EENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGR 392
           E+ +AV  QT   +  Q+ +T Q+A A+++  ATV EVA++A  A+EA+  A+Q A +G 
Sbjct: 375 EQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEVARNAEEASEAAVAADQQAREGD 434

Query: 393 KVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAA 452
           KVV E IA IE L+ ++     AM  L ++S+ IGSV+DVI+S+++QTNLLALNAAIEAA
Sbjct: 435 KVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIGSVLDVIKSVAQQTNLLALNAAIEAA 494

Query: 453 RAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVE 512
           RAGE GRGFAVVADEVR+LA RTQ+ST++I + +  LQ  ++  A +++        +VE
Sbjct: 495 RAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQSGTQQVATIMDNSRGLTDSSVE 554

Query: 513 KARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQ 572
             R AG+AL+ IT  V  I  MN+QIATA+E+QSAV EEIN++++ + ++S QTA  +++
Sbjct: 555 LPRRAGSALASITRTVSTIQAMNSQIATAAEQQSAVAEEINRSVLNVRDVSEQTAAASEE 614

Query: 573 SSEATLELARLAESMQQEVARY 594
           ++ ++ ELARL   +Q  V R+
Sbjct: 615 TAASSTELARLGTHLQALVGRF 636