Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  214 bits (546), Expect = 5e-60
 Identities = 132/303 (43%), Positives = 188/303 (62%), Gaps = 7/303 (2%)

Query: 300 FSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQ-------NIVEQQSQ 352
           +SD      R+ T+F    +  +  ++ L  +AE+ +A+A Q+ Q        +  Q+ +
Sbjct: 218 YSDARGPQARLETAFLSQNARLKTCLTRLQDSAEQLSALAGQSDQLASASSKGLDRQRVE 277

Query: 353 TQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKM 412
           T+Q++AA++Q  AT  EVA      A+A+++A     +GR+V  +    IE LS  + + 
Sbjct: 278 TEQVSAAVNQMAATTQEVASHVQRTADATQQANVLTGRGREVARDTREAIERLSAVVSET 337

Query: 413 LAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 472
              +  LAKDS +IGSVVDVI+ I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA
Sbjct: 338 GVTVAQLAKDSNEIGSVVDVIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLA 397

Query: 473 SRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRIS 532
            RT +ST QI   + +LQ SS ++   +E G   A + V     A  AL  I+  V  I+
Sbjct: 398 QRTSQSTTQIHGLITQLQASSNNAVQSMENGQRQAQEGVAWVLEADQALVGISEAVSHIT 457

Query: 533 TMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVA 592
            M TQIA A+EEQSAV EEI++NI TI+E+++QT+L A QS++ + EL   A +    V 
Sbjct: 458 DMTTQIAAATEEQSAVAEEISRNITTIAELADQTSLQAHQSTDLSKELTNTASTQYALVE 517

Query: 593 RYN 595
           R+N
Sbjct: 518 RFN 520