Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  227 bits (578), Expect = 1e-63
 Identities = 155/458 (33%), Positives = 243/458 (53%), Gaps = 12/458 (2%)

Query: 142 QTSLTNLHRIVDNEILATVLDVQEKAVIQTLKEKLDQVTRQGFEPALQQLKAEKYDAANL 201
           Q S   L R+  N    T    +E  ++  +K  ++       E  +   ++     A  
Sbjct: 95  QDSAVMLDRLFAN----TTASAEETRLLGDIKA-IETQALASTERVINLRRSNDTAGAQD 149

Query: 202 ILLQVINPLYNEIKKAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSL 261
           +LL   +  Y E  K   A +D +    K      Q     F  ++ L  A A+I++  +
Sbjct: 150 LLLAQASVHYTEWLKRVNALIDFEEAHIKQRLDTVQSAAGTFAMLMVLASAVAIILSVLV 209

Query: 262 ALLIAKRVNNAV----HHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEV 317
           +LLI ++V   +      +A +   +A G+L QRI     D    I K     +    + 
Sbjct: 210 SLLIIRKVKATLGAEPEEVAEAIRRLADGELNQRIETRYPDSVMGILK---NALARLSDT 266

Query: 318 ISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLA 377
           IS  R +  AL  ++    +VA   +Q I  Q S+ Q +AAAI Q  A+V EV+  A  A
Sbjct: 267 ISEVRSAAQALRHSSVTLLSVASDNRQQINLQTSEAQHVAAAITQMAASVSEVSGYASAA 326

Query: 378 AEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSIS 437
           ++A+  A+     G ++V E    IE L+  L      +  ++ DSE+I +V++VI +I+
Sbjct: 327 SKATILADAEVDSGHRLVGEVTVSIEELATILDHATLRVNQVSSDSENIETVIEVINAIA 386

Query: 438 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSA 497
            QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA+RTQEST++I   + +LQ  ++D+A
Sbjct: 387 AQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLATRTQESTQEIRDMIGKLQSGTQDAA 446

Query: 498 NLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNII 557
           +++++  S A   V + R +  AL +I+  V  I+ MN QIA+ S +QSA  EE+ +N+ 
Sbjct: 447 DIMQRSRSLAQTTVTQTRDSQLALGKISQEVGAINAMNAQIASVSVQQSAAAEEVAQNVT 506

Query: 558 TISEISNQTALGAQQSSEATLELARLAESMQQEVARYN 595
            I   + Q+A G++Q   +  ELA LA+ +  +VA +N
Sbjct: 507 RIHSSTVQSAAGSEQVENSNHELAELADRLSTKVAFFN 544