Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  240 bits (613), Expect = 1e-67
 Identities = 143/341 (41%), Positives = 202/341 (59%), Gaps = 2/341 (0%)

Query: 250 LGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG--DLTQRIPVTGNDEFSDIAKYV 307
           LG  A +V   L  L+A+ V   +  +A     IA+G  DLT+R+     DE   +A + 
Sbjct: 367 LGLLAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQDELGQLAGWF 426

Query: 308 NRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATV 367
           NR +   Q +I+  + SV      A+++AA+A QT   + +Q  Q  Q+A A H+ +AT 
Sbjct: 427 NRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATASHEMSATA 486

Query: 368 HEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIG 427
            +VA+SA  AA+A+ +A+QA   G  V+E     I  L++D+   +  ++ LA +SE IG
Sbjct: 487 QDVARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDMSTAMTQVEGLAANSEKIG 546

Query: 428 SVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQ 487
           SV++VI+ I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQES ++    ++
Sbjct: 547 SVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRLVIE 606

Query: 488 RLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSA 547
            LQ  +      +      A  +VE+   A TAL QI   V  IS MN QIA+A+EEQSA
Sbjct: 607 HLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQSA 666

Query: 548 VTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQ 588
           V EEIN N+ TI +++   +  A +S+  +  L  LA   Q
Sbjct: 667 VAEEINNNVATIRDVTESLSEQANESARVSQALNSLANQQQ 707