Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  271 bits (692), Expect = 8e-77
 Identities = 178/498 (35%), Positives = 268/498 (53%), Gaps = 7/498 (1%)

Query: 105 DELGSARSQLLLAFQHDPSSKYALMHDHPITMHVEGI-QTSLTNLHRIVDNEILATVLDV 163
           + +   ++Q LL    D      L     ++ HVEG  Q SL   +  V  E  A V D 
Sbjct: 149 EAIDQLQTQALLKMPDDSQQSGVLGLMDTLSRHVEGANQQSLVPAYTFVPVEDFAKVGDN 208

Query: 164 QEKAVIQTLKEKLDQVTRQGFEPALQQLKAEKYDAANLILLQV------INPLYNEIKKA 217
              A   +L + L+ +   G   A+ +    +       L Q       +  L N ++  
Sbjct: 209 ALNAADSSLAQLLEGLAPLGLPRAISEQPGVELSKYRTSLDQYRRAAVRVEQLQNNMEIM 268

Query: 218 AEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLA 277
                 +    GK        E      +++ +   A++V    A LI  ++   +    
Sbjct: 269 GNELRTVSLDLGKRKVEQRDREALAARSLLTSVALLAMVVGALAAWLITLQITQPLRQTL 328

Query: 278 SSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAA 337
           + A  IA GDL+Q   V   DE   +   +  +  S +++I      V  L+ AA + AA
Sbjct: 329 AVAARIAKGDLSQVDTVQRRDEMGQLQTSMREMTLSLRDLIGGIDQGVGQLSQAATQLAA 388

Query: 338 VAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEE 397
            +  TK  I +Q+ +T Q+A A++Q +ATV EVAQ+A  A+ A+  A+Q A  G +VV E
Sbjct: 389 SSEDTKLRINQQREETDQVATAMNQMSATVQEVAQNAEQASLAATNADQQAQVGDQVVSE 448

Query: 398 NIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQ 457
            I  IE L+  +   LAAMQ LA +S+ IGS++DVI+S+SEQTNLLALNAAIEAARAGE 
Sbjct: 449 AIGRIEQLAGQMDHCLAAMQHLAGESQRIGSILDVIKSVSEQTNLLALNAAIEAARAGEA 508

Query: 458 GRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLA 517
           GRGFAVVADEVR LA RT  +T++I Q +  L   + +   L++   S   ++VE +R A
Sbjct: 509 GRGFAVVADEVRGLAQRTSTATEEIGQLIDSLHNGTDEVTRLLDSSKSLTEQSVELSRRA 568

Query: 518 GTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEAT 577
           G ALSQIT  V  I  MN QIATASEEQS V E+IN+++I + ++S+QT+  ++Q++ ++
Sbjct: 569 GHALSQITDTVSSIQGMNQQIATASEEQSVVAEQINRSVINVRDVSDQTSAASEQTAASS 628

Query: 578 LELARLAESMQQEVARYN 595
            EL +L + ++  V R++
Sbjct: 629 GELEQLGQQLRGMVGRFS 646