Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  228 bits (582), Expect = 4e-64
 Identities = 133/349 (38%), Positives = 211/349 (60%), Gaps = 2/349 (0%)

Query: 248 SLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG--DLTQRIPVTGNDEFSDIAK 305
           SL+G    ++   + +LIA+ +   +     +  +IA+G  DLT+R+   G+DE + + +
Sbjct: 194 SLVGVGIALLMALVVMLIARSIARPLQEAVQAMGNIASGESDLTRRLDTHGSDEITHLGE 253

Query: 306 YVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTA 365
           + NR     Q V+   + +  ALA +A      A   +Q   +Q  Q  Q+A A+++ T 
Sbjct: 254 HFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGAAQQRSAQQSLQMDQVATAVNEVTY 313

Query: 366 TVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSED 425
            V +VA++A  AA     A+Q    G++ +  ++A I+ LS  + + +  ++ LA  S  
Sbjct: 314 AVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQIDRLSLTIDEAVQVIRDLAGHSTR 373

Query: 426 IGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQT 485
           IG V+DVI+SI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT +ST +I   
Sbjct: 374 IGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTAQSTAEIHTM 433

Query: 486 VQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQ 545
           ++ LQ  S  +   I+     + + VE+AR AG +L  I   ++ ++ +N  IA+A+ +Q
Sbjct: 434 IEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASLDAINQVLNNLTALNASIASATLQQ 493

Query: 546 SAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
           S V EEIN+N++  + +S QTA  A+QSS+A + L RL+E ++Q + ++
Sbjct: 494 SHVVEEINRNVLDTAGLSQQTADAARQSSDAGVALGRLSEELEQLLRQF 542