Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., aromatic acid chemoreceptor from Pseudomonas putida KT2440

 Score =  221 bits (564), Expect = 5e-62
 Identities = 134/350 (38%), Positives = 203/350 (58%), Gaps = 4/350 (1%)

Query: 249 LLGAFALIVTTSLALL----IAKRVNNAVHHLASSATHIAAGDLTQRIPVTGNDEFSDIA 304
           LL    L VT  LA+L    IA+RV + +         IA+GDL+  +   GN+E   + 
Sbjct: 199 LLSLCLLGVTVVLAVLCWAFIAQRVLHPLREAGGHFRRIASGDLSVPVQGQGNNEIGQLF 258

Query: 305 KYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFT 364
             + R+  S ++ +    +    L  AA    AV  ++  N+ +Q  + +Q A A+ + T
Sbjct: 259 HELQRMQQSQRDTLGQINNCARQLDAAATALNAVTEESANNLRQQGQELEQAATAVTEMT 318

Query: 365 ATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSE 424
             V EVA++A   ++ + E+ Q A Q R+ V ENI   E ++ ++Q   A +Q L     
Sbjct: 319 TAVEEVARNAITTSQTTSESNQLAAQSRRQVSENIDGTEAMTREIQTSSAHLQQLVGQVR 378

Query: 425 DIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQ 484
           DIG V++VI+S+SEQTNLLALNAAIEAARAGE GRGFAVVADEVRTLA RTQ+ST++I Q
Sbjct: 379 DIGKVLEVIRSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLAYRTQQSTQEIEQ 438

Query: 485 TVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEE 544
            +  +Q  +  +   ++   + A   ++    +G  L  I + +  I+  N  IA+A+EE
Sbjct: 439 MIGSVQAGTEAAVASMQASTNRAQSTLDVTLASGQVLEGIYSAIGEINERNLVIASAAEE 498

Query: 545 QSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARY 594
           Q+ V  E+++N++ I E+SN +A GAQQ+SEA+  L+ L   M   V R+
Sbjct: 499 QAQVAREVDRNLLNIRELSNHSAAGAQQTSEASKALSGLVGEMTALVGRF 548



 Score = 45.1 bits (105), Expect = 8e-09
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 481 QILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMNT-QIA 539
           Q+   +QR+QQS RD+   I    +  ++ ++ A  A  A+++ +AN  R       Q A
Sbjct: 256 QLFHELQRMQQSQRDTLGQI----NNCARQLDAAATALNAVTEESANNLRQQGQELEQAA 311

Query: 540 TASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVARYNA 596
           TA  E +   EE+ +N IT S+ ++++   A QS     E     E+M +E+   +A
Sbjct: 312 TAVTEMTTAVEEVARNAITTSQTTSESNQLAAQSRRQVSENIDGTEAMTREIQTSSA 368