Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  235 bits (599), Expect = 4e-66
 Identities = 138/358 (38%), Positives = 213/358 (59%), Gaps = 8/358 (2%)

Query: 236 SQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAGDLTQRIPVT 295
           S + +   I M+++LGA  L++   L+ L    + + + H+  +      GDL+ R+P+ 
Sbjct: 140 SNYAVCVLILMLAMLGASQLLIRFLLSQL--NTLKDVMLHVEKT------GDLSARVPLA 191

Query: 296 GNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNIVEQQSQTQQ 355
             DE   +A   N + +++  V+S+  HS + L + A   AA     +  ++ QQS+T Q
Sbjct: 192 SGDEVGQMAGAFNAMQSTYHRVVSTVAHSAAQLDSGAARLAASMSDVRHGMLGQQSETDQ 251

Query: 356 IAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLSNDLQKMLAA 415
            A AI++ +ATVH +AQ AG   + S+ A+  A  G+ VV      I GLS+ +Q+    
Sbjct: 252 AATAINEMSATVHHIAQHAGATRDLSQTADTLAGSGQAVVSRVQDSISGLSSGVQQTAEM 311

Query: 416 MQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRT 475
           ++ LA+DS+ I  VV VI SI+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA R 
Sbjct: 312 IRQLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRV 371

Query: 476 QESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITANVDRISTMN 535
           Q ST +I   V  LQ  +RD+   +++    A   V +A+ AG AL++IT  V ++   N
Sbjct: 372 QTSTDEITTMVSALQSGTRDAVEFMQESSYKADDCVRQAQEAGEALAEITGAVAQMRESN 431

Query: 536 TQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAESMQQEVAR 593
           TQIA A+E+QS V EE+N+ +++I +++ +T      S+  + ELA LA  + + + +
Sbjct: 432 TQIAVAAEQQSQVAEEMNRAVVSIRDVTERTVQQTVGSATTSSELATLAGELNKAIGQ 489