Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  247 bits (630), Expect = 1e-69
 Identities = 154/440 (35%), Positives = 250/440 (56%), Gaps = 5/440 (1%)

Query: 157 LATVLDVQEKAVIQTLKEKLDQVTRQGFEPALQQL-KAEKYDAANLILLQVINPLYNEIK 215
           L  ++   E+A      + L+Q  +   E  ++ L +A++ D    +L + +     +I 
Sbjct: 103 LPMIVAADEQAAFDQYGQLLNQYRQ--LESRMRTLSQADRLDELRDLLNRDLLANSEQIN 160

Query: 216 KAAEAFLDIQTQEGK-NNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVH 274
           K  +  + I T + +  N  A+      F  ++ LL A A ++T + A L+ + +   + 
Sbjct: 161 KVMDTLVRINTDQTRATNEKAANQYAGAFALVIGLLVA-ATVLTFACAFLLTRSIVKPIE 219

Query: 275 HLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEE 334
                A  +A GDLT  I   G DE + + + + R+    ++ +     S + LA+AAEE
Sbjct: 220 EALKCAEQVADGDLTHVIRAEGTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEE 279

Query: 335 NAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKV 394
             AV  ++ + + +Q ++ +Q A A+ + T+ V EVA++A   +EAS EA ++   GR +
Sbjct: 280 LNAVTDESARGLQQQNNEIEQAATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDL 339

Query: 395 VEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARA 454
           V E +  IE +S D+Q     +  LA+ S DIG V+DVI+ +++QTNLLALNAAIEAARA
Sbjct: 340 VMETVGAIERMSGDVQATAKLITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARA 399

Query: 455 GEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKA 514
           GE GRGFAVVADEVR LA RTQ+ST +I + +  +Q  + ++   +      A   +  A
Sbjct: 400 GEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIA 459

Query: 515 RLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSS 574
           R AG AL  I   V +I+  N  IA+A+EEQ+ V  E+++N++ I+++S Q+A GA Q+S
Sbjct: 460 RGAGMALDTIAGAVAQINERNLVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTS 519

Query: 575 EATLELARLAESMQQEVARY 594
            A+ EL+RLA  +   VAR+
Sbjct: 520 AASAELSRLAVDLNGLVARF 539