Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  248 bits (634), Expect = 4e-70
 Identities = 155/428 (36%), Positives = 246/428 (57%), Gaps = 8/428 (1%)

Query: 173 KEKLDQVTRQGFEPALQQLKAEKYDAA-----NLILLQVINPLYNEIKKAAEAFLDI-QT 226
           K KLD V +Q     + +L+   +D       N+      N   + I   A+   ++ QT
Sbjct: 225 KNKLDAVLQQPASVDVARLQKLGFDTPLGDPLNIKPEDWFNLSTSRIDMMAQVEAELGQT 284

Query: 227 QEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSATHIAAG 286
                N + +  + + ++ + +++    LI    LA +I + +  AV  +  +   ++  
Sbjct: 285 VVSLANVARTDAQRSLYVAIATVI--LMLIAVLWLASVIIRNIKIAVVDVNRTLISLSTR 342

Query: 287 DLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQTKQNI 346
           DLT R   TG DEF +I++ ++ +     EVI     + + +ATAAE+++AVA+QT  N+
Sbjct: 343 DLTARTRYTGRDEFGEISRNLDNMAIQIGEVIREIGSATAQVATAAEQSSAVALQTSNNV 402

Query: 347 VEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAMIEGLS 406
           V+Q+  T Q+  AI + +ATV +VA+S   AAE S+    + MQG+  +E  I++I+GL 
Sbjct: 403 VQQRQGTDQVVTAISEMSATVKDVARSTTDAAEMSQRVNASTMQGKAEIENTISLIKGLE 462

Query: 407 NDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGFAVVAD 466
              ++    ++ L  +S  I SV+DVI+ ++EQTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 463 VQAEQTSRIIEELKGESYSISSVLDVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVAD 522

Query: 467 EVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTALSQITA 526
           EVR LA +TQ+ST  I + +  LQ  S  +A  +++ +  A +       AG  L +I  
Sbjct: 523 EVRNLAKKTQDSTVSIQKMIANLQSGSDRAATSMQETLGKAQEGASNVVRAGELLEEIAE 582

Query: 527 NVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELARLAES 586
            +  IS  N Q+A+A+E+QS V EEI++N+  I+ +  Q + GA+Q++  + ELARLAE 
Sbjct: 583 GIATISDSNIQVASAAEQQSQVAEEIHRNVNDINTLVIQVSAGAEQTAVTSRELARLAEQ 642

Query: 587 MQQEVARY 594
            Q  V R+
Sbjct: 643 QQGLVGRF 650



 Score = 35.0 bits (79), Expect = 1e-05
 Identities = 22/92 (23%), Positives = 41/92 (44%)

Query: 505 SGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISN 564
           +G  +  E +R       QI   +  I +   Q+ATA+E+ SAV  + + N++   + ++
Sbjct: 351 TGRDEFGEISRNLDNMAIQIGEVIREIGSATAQVATAAEQSSAVALQTSNNVVQQRQGTD 410

Query: 565 QTALGAQQSSEATLELARLAESMQQEVARYNA 596
           Q      + S    ++AR      +   R NA
Sbjct: 411 QVVTAISEMSATVKDVARSTTDAAEMSQRVNA 442