Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  244 bits (622), Expect = 9e-69
 Identities = 154/441 (34%), Positives = 247/441 (56%), Gaps = 9/441 (2%)

Query: 158 ATVLDVQEKAVIQTLKEKLDQVTR---QGFEPALQQLKAEKYDAANLILLQVINPLYNEI 214
           AT L+  E+A      +KLDQ+        E  +  L   + D A   L    N ++ + 
Sbjct: 103 ATPLEDDERAA----GDKLDQILPTYISSSERIMSLLDGNQVDEARTQLNTTNNEVFRQA 158

Query: 215 KKAAEAFLDIQTQEGKNNFSASQHEINQFI-WMVSLLGAFALIVTTSLALLIAKRVNNAV 273
           ++     ++   ++ K    A+    N  + WM+S +   A I+  ++ +LI + +   +
Sbjct: 159 RELIRVMIESNNRQIKEGAVAADELRNSALTWMISGI-VLAFIIALTVGVLITRLITRPI 217

Query: 274 HHLASSATHIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAE 333
                SA  IA GDLTQ I     DE   +   ++ +    +  +    ++   LA+AAE
Sbjct: 218 AQAVQSAQRIAKGDLTQAITTERTDEAGQLLVALSDMQGGLKSTLVEIANASDQLASAAE 277

Query: 334 ENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRK 393
           E +AV  ++ + +  Q  + QQ A A++Q TA V EVA +A   +EAS +A   A  GR+
Sbjct: 278 ELSAVTDESSRGLTRQNDEIQQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQ 337

Query: 394 VVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAAR 453
            VE+ ++ +  +  ++     ++  LA    +IG V+DVI+SI++QTNLLALNAAIEAAR
Sbjct: 338 QVEQAVSGMSSMVVEINDSTQSVADLAGQVREIGKVIDVIRSIADQTNLLALNAAIEAAR 397

Query: 454 AGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEK 513
           AGEQGRGFAVVADEVR LA RTQ ST  I + +  +Q  +  +   + + ++ A+     
Sbjct: 398 AGEQGRGFAVVADEVRALAHRTQTSTVDIEKMIGEVQTGADGAVAAMNKSLNWANNTQTL 457

Query: 514 ARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQS 573
           A+ AG AL +ITA+V +I+  N  IA+ASEEQ+ V  E+++N++ I ++S QTA GA Q+
Sbjct: 458 AQNAGEALQRITASVAKINERNLVIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQT 517

Query: 574 SEATLELARLAESMQQEVARY 594
           S ++ +L+RLA S    V+++
Sbjct: 518 SASSQDLSRLATSFNVLVSKF 538