Pairwise Alignments

Query, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  223 bits (569), Expect = 1e-62
 Identities = 136/384 (35%), Positives = 212/384 (55%), Gaps = 2/384 (0%)

Query: 207 INPLYNEIKKAAEAFLDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIA 266
           +N  Y+    A   F D Q    +  F  +       I    +L     I+    A+ I 
Sbjct: 148 MNQSYDGAIAAMSQFRDAQQAAFEEAFKNTDSANTSLISTGVILAVVVTILLFGTAVPIV 207

Query: 267 KRVNNAVHHLASSATHIAA--GDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHS 324
           + +  ++  +  S   IA   GDLT RI     DE  ++  + N+ +   Q V+     +
Sbjct: 208 RGIKQSIDDVVRSLKDIAQENGDLTVRIETKSEDEIGELVYWFNQFMDKLQGVVRDVVEA 267

Query: 325 VSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEA 384
              L+  A+    V  +T++ I  QQ        A+   + +V  VA SA  AA  + EA
Sbjct: 268 SLPLSNLAQNLRGVTEETQRTIDVQQKSATNAKRAVDTMSGSVDGVAHSAAQAASDANEA 327

Query: 385 EQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLA 444
             AA +GR++V++ +  I+ L+ ++++    +  L  DS  +GSV+DVI+ I+EQTNLLA
Sbjct: 328 TTAAREGRQIVQQTVTSIQQLAENVRETADVIARLESDSNKVGSVLDVIKGIAEQTNLLA 387

Query: 445 LNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGV 504
           LNAAIEAARAGEQGRGFAVVADEVRTLASRTQ+ST++I  T+++LQ ++  +  ++ +G 
Sbjct: 388 LNAAIEAARAGEQGRGFAVVADEVRTLASRTQQSTEEIQSTIEQLQNAAHSAVEVMSRGT 447

Query: 505 SGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISN 564
             A+ +VE A  AG++L  IT+ + RI+ MN QIA  +E+Q  V  +I +++  I E + 
Sbjct: 448 EQATSSVETANKAGSSLETITSTIGRINQMNEQIAHNTEDQRTVAVDIVRHVDEIHERTE 507

Query: 565 QTALGAQQSSEATLELARLAESMQ 588
           QTA  + +      ELA LA+ ++
Sbjct: 508 QTASRSGELGSMCNELADLAQHLE 531