Pairwise Alignments

Query, 462 a.a., ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  187 bits (474), Expect = 8e-52
 Identities = 129/457 (28%), Positives = 221/457 (48%), Gaps = 43/457 (9%)

Query: 17  SLKTRLLLAAALWLGAMILAAGYLIPNLIHQYLLEDVQNQLQLSMDEITANLEANPQGQL 76
           S+  RL + + +++ A ++ A  ++  ++   + E +  +L   ++ + + L  +  G++
Sbjct: 11  SISRRLTVFSVIFVTASVMIASIILYLIVAGVVREQIDQRLDTQIEGLRSALSIDEAGRV 70

Query: 77  TLTTRLADPRFTQPYSGLYWSATLGDQTLRSRSL-------------WDRFLTE------ 117
           TL   L  P F +  SG YW        + SRSL             W + +        
Sbjct: 71  TLNAALDGPPFDRRGSGWYWQIRGEGVAITSRSLAGQSLDNPPSPFNWGKMMEHGPRPGV 130

Query: 118 ETHVHGT-IYLGAKEESL--IVLKRTVYLPEFSQPITITIGLDDAPLKATLQRVSKELWM 174
              +HG  +YL + +  +   +++ T   P F+           AP ++ L      LW+
Sbjct: 131 NAELHGQDLYLRSIQTMVGAKLIEITATAPRFALV---------APARSAL------LWL 175

Query: 175 ILALLFSGILVLTGV--QVTWSLRPLSKMQRELSALRDGQQNALNGDYPQEISPLVNDLN 232
           I A+   G  ++ G+  QV + LRPL ++  ++S++  G    L     QE+ P   ++N
Sbjct: 176 IPAMTLLGASLVAGIFLQVRYGLRPLRQLTADISSISAGTLERLPDADVQELRPASREIN 235

Query: 233 ALLFHYQELLERARHHAGNLSHALKTPLSVLKNEVTQLNDAQLRIQLQPSVEQIQQQIDY 292
            L+    E L   R H  NL+H LKTP++ L   +   ND      ++  V++I Q+I +
Sbjct: 236 RLVEQNSERLTETRLHFANLAHGLKTPVTSLYLALNDTNDPDNT--MRALVDRIDQRIRH 293

Query: 293 HLGRARMAGSANILSVKTAPSARVDAISQAFDKVYAERGITLVNELDSDLEVAVEPTDLD 352
           HL RAR   +  + +  T    RVD I +    +YA+RG+    E+D  L V V P DLD
Sbjct: 294 HLARARKTAAGGVAAT-TPVRPRVDDILEIMTHIYADRGVVATVEVDDTLRVQVGPEDLD 352

Query: 353 EMIGNLLENSYKWANSLIRVHSQILSDDWVQICVEDDGAGISATNREKALKRGVRLDETT 412
           E+IGN+ +N++KWA   +R+ ++    D + + + DDG GI      +  + G R+DET 
Sbjct: 353 EIIGNITDNAFKWAKGRVRISARQTGRD-ILLTISDDGPGIDNALVSEVFEPGRRMDETV 411

Query: 413 PGTGLGLNIVSEMAHSYRGALALGESQLGGLKATLTL 449
           PG G GL IV E+   + G +++  +  GGL   LTL
Sbjct: 412 PGDGFGLTIVKELVELHGGRISMERNGDGGLTCLLTL 448