Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., Transcriptional regulatory protein QseB from Xanthobacter sp. DMC5

 Score =  176 bits (446), Expect = 3e-49
 Identities = 94/220 (42%), Positives = 141/220 (64%), Gaps = 8/220 (3%)

Query: 1   MKILVVEDDVQLGQQILSALEQTG----WVPELAQDGIDALYRATAEEWDVIVLDLGLPK 56
           M+IL++EDD  LG  +   +   G    WV  LA    DA +   A  +D+I+LDL LP 
Sbjct: 1   MRILLIEDDPVLGMAVRDQIVADGHGADWVTRLA----DAEHAVHAAAFDLILLDLMLPD 56

Query: 57  LDGLTVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQL 116
             G   L+ +R     TPV++L+ARD ++ R+  L+AGADDYL KPF++ EL ARIRA  
Sbjct: 57  GRGSDFLRKLRSTGDATPVMVLTARDQISDRIAALDAGADDYLVKPFDLFELSARIRAVG 116

Query: 117 RRASGNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVE 176
           RR +GN +P++ +GD+ +D     V   GQ ++LTA E+ +   F+  P +++S+ +L E
Sbjct: 117 RRYAGNPNPLVTLGDIEVDLSARSVRRAGQTIALTAREWALFEAFVQRPHQLMSKPQLEE 176

Query: 177 HIYKQDFDRDSNTIEVFIGRIRKKIAPDVIKTVRGLGYQL 216
            +Y  D + +SNTIEV++ R+RKK+  DVI+TVRG+GY+L
Sbjct: 177 RLYSFDAEVESNTIEVYVARLRKKLGADVIETVRGMGYRL 216