Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  168 bits (425), Expect = 8e-47
 Identities = 86/219 (39%), Positives = 138/219 (63%), Gaps = 5/219 (2%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M ILVVED+ + G  +L+ L++ G+   LA+DG+D L++A    +DVIVLD+ +PK+DG 
Sbjct: 1   MNILVVEDEPKAGNYLLNGLQELGYSVSLARDGVDGLHQALETPFDVIVLDVMMPKMDGW 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            VL+ +R E  +TPV+ L+ARD +  R++GL  GADDYL KPF   EL+AR+R   RR  
Sbjct: 61  EVLRRLRKE-ADTPVLFLTARDDIADRIKGLELGADDYLIKPFSFAELVARLRTLTRRGP 119

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
                 +Q+ DL +D    +V   G  ++LT  E+ ++  F  + ++V+SR+ +   ++ 
Sbjct: 120 SRDEEQLQIADLQIDVLKRRVTRAGTRITLTNKEFALLHLFATHQDQVLSRSLIASRVWD 179

Query: 181 QDFDRDSNTIEVFIGRIRKKIAP----DVIKTVRGLGYQ 215
            +FD D+N ++V + R+R KI       +I +VRG+GY+
Sbjct: 180 MNFDSDTNVVDVAVRRLRLKIDDPFQLKLIHSVRGIGYR 218