Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., Copper-sensing two-component system response regulator CusR from Variovorax sp. SCN45

 Score =  171 bits (434), Expect = 8e-48
 Identities = 89/220 (40%), Positives = 138/220 (62%), Gaps = 5/220 (2%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M+ILV+ED+ +LG  +   LE+ G+V ++A+DGI+  Y AT  ++ +++LD+ LP +DG 
Sbjct: 1   MRILVIEDEPKLGDYLKKGLEENGYVVDIARDGIEGKYLATEGDYALVLLDVMLPGIDGF 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            VL+ IR    N PV++L+ARD +  RV+GL  GADDYL KPF   EL+AR++A LRR  
Sbjct: 61  AVLQAIRRTK-NVPVLVLTARDKVEDRVQGLQQGADDYLVKPFSFSELLARVQALLRRGK 119

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
              S  +++ DL LD  + K       + LTA E+ ++   +    +++SRT L E ++ 
Sbjct: 120 PQESTTLRLADLELDLVSRKCFRNRARLDLTAKEFTLLVVLLRRRGQILSRTTLAEQVWD 179

Query: 181 QDFDRDSNTIEVFIGRIRKKIAP----DVIKTVRGLGYQL 216
            +FD D+N +EV I R+R K+       ++ TVRG+GY L
Sbjct: 180 MNFDSDTNVVEVAIRRLRSKLDDPFDVKLLHTVRGMGYVL 219