Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  162 bits (410), Expect = 5e-45
 Identities = 88/220 (40%), Positives = 134/220 (60%), Gaps = 4/220 (1%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M+IL++EDD +  + +   L++ G+V ++     +    A    +D+IVLD  LP  DGL
Sbjct: 1   MRILLIEDDRKAARLLARGLQEEGFVVDVVHTAEEGDEEAFVIAYDLIVLDWMLPGKDGL 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
           T+ + +R     TPV++L+ARD L  RV GLN GADDYLTKPF   EL+AR+RA LRR+ 
Sbjct: 61  TLCRDLRQRGCKTPVLMLTARDALGDRVTGLNTGADDYLTKPFAFDELLARVRALLRRSE 120

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
                V+ + DLSLD  + +V+  G  + LT  E+ ++   + +  +V+SR+ L E ++K
Sbjct: 121 IMRPMVLTLADLSLDPLSQRVLRGGMVLDLTHKEFAILQILLRHAGEVVSRSRLAEQVWK 180

Query: 181 QDFDRDSNTIEVFIGRIRKKI----APDVIKTVRGLGYQL 216
            D     N I+V IG +R+K+    AP +I TVRG G++L
Sbjct: 181 DDLIAIDNLIDVHIGNLRRKVDAPPAPPLIHTVRGRGFRL 220