Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., Two-component transcriptional response regulator SMc02366, LuxR family from Sphingobium sp. HT1-2

 Score =  171 bits (434), Expect = 8e-48
 Identities = 88/221 (39%), Positives = 141/221 (63%), Gaps = 6/221 (2%)

Query: 2   KILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGLT 61
           KILVVEDD      I+  + + G+  + A +G D L+ A+   +  I+LD  +P +DG+ 
Sbjct: 4   KILVVEDDAATAAYIVKGMTEAGFTVDQADNGRDGLFLASDGSYGAIILDRMMPAMDGMA 63

Query: 62  VLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRASG 121
           +LK +R  +I TPV+ LSA  T   RVEGL +G+DDYLTKPF   EL+AR++  LR+A G
Sbjct: 64  MLKALRAASIETPVIFLSALGTPEDRVEGLTSGSDDYLTKPFAFAELLARVQLLLRKAGG 123

Query: 122 NASPV--MQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIY 179
           NA+ V  ++  DL +D    +V   G+A+ L   E++++ +F+ +P++V++RT L+E ++
Sbjct: 124 NAAVVTSLRYDDLDMDLLARRVKRAGKAIDLQPREFRLLEFFLRHPDQVVTRTMLLEGVW 183

Query: 180 KQDFDRDSNTIEVFIGRIRKKIAP----DVIKTVRGLGYQL 216
              FD  +N I+V I R+R+K+       ++ TVRG+GY+L
Sbjct: 184 DYHFDPGTNVIDVHISRLRRKLDDVSDRPLLHTVRGMGYRL 224