Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  186 bits (473), Expect = 2e-52
 Identities = 96/215 (44%), Positives = 144/215 (66%), Gaps = 1/215 (0%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M++L+VED+V L  ++ + L++ G+  +   DG DA+Y+  +E +D+I+LDLGLP L GL
Sbjct: 1   MRLLLVEDNVPLADELTAGLQRQGYAVDWLADGRDAVYQGQSEPYDLIILDLGLPGLPGL 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            VL   R   + TPV+IL+AR +  +R+EGL AGADDYL+KPF   EL  RI+A LRRA 
Sbjct: 61  DVLAQWRAAGLATPVLILTARGSWAERIEGLKAGADDYLSKPFHPEELQLRIQALLRRAR 120

Query: 121 GNAS-PVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIY 179
           G A+ P ++   L LD     V   G  V LTA E++++ YFM +P++++S++ L EH+Y
Sbjct: 121 GLANQPKLEAAGLHLDESRQCVSRDGVDVQLTAAEFRLLRYFMLHPQQILSKSHLAEHLY 180

Query: 180 KQDFDRDSNTIEVFIGRIRKKIAPDVIKTVRGLGY 214
             + +RDSN +EV +  +R+K+   VI+T RG GY
Sbjct: 181 DGETERDSNVLEVHVNHLRRKLGRSVIETRRGQGY 215