Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., response regulator from Pseudomonas putida KT2440

 Score =  170 bits (431), Expect = 2e-47
 Identities = 89/221 (40%), Positives = 139/221 (62%), Gaps = 5/221 (2%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           M+ILV+ED+V+  + +   L + G+V +    G D L+ A   E+++I+LD+ LP++DG 
Sbjct: 1   MRILVIEDEVKTAEYVRQGLTECGYVVDCVHTGSDGLFLAKQHEYELIILDINLPEMDGW 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            VL+ +R +N  + +++L+AR  L  +V GL  GADDYL KPFE  EL+AR+RA +RR+ 
Sbjct: 61  QVLELLRRKNCPSRIMMLTARSRLADKVRGLENGADDYLIKPFEFPELLARVRALMRRSD 120

Query: 121 GNAS-PVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIY 179
             AS  V++V DL LD    +    GQ + LT  E+ ++ Y M N   V+SRT+++  ++
Sbjct: 121 HPASVEVIRVADLELDQSRHRAFRDGQRIDLTTKEFALLHYLMRNTGVVLSRTQIISQVW 180

Query: 180 KQDFDRDSNTIEVFIGRIRKKI----APDVIKTVRGLGYQL 216
             +FD D+N +EV I R+R KI       +I T+RG+GY L
Sbjct: 181 DMNFDCDTNVVEVSIRRLRAKIDDPFETKLIHTLRGVGYVL 221