Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., DNA-binding response regulator in two-component regulatory system with CusS (NCBI) from Escherichia coli BW25113

 Score =  161 bits (408), Expect = 8e-45
 Identities = 82/221 (37%), Positives = 140/221 (63%), Gaps = 5/221 (2%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           MK+L+VED+ + G+ +   L + G+V +LA +G++  + A   ++D+I+LD+ LP ++G 
Sbjct: 1   MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGW 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRR-A 119
            +++ +R  N   P+++L+A  T+  RV+GL  GADDYL KPF   EL+AR+R  LRR A
Sbjct: 61  DIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGA 120

Query: 120 SGNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIY 179
           +       QV DL +D  + KV   G  ++LT+ E+ ++ +F+ +  +V+ R+ +   ++
Sbjct: 121 AVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLEFFLRHQGEVLPRSLIASQVW 180

Query: 180 KQDFDRDSNTIEVFIGRIRKKI----APDVIKTVRGLGYQL 216
             +FD D+N I+V + R+R KI     P +I+TVRG+GY L
Sbjct: 181 DMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVGYML 221