Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., two-component system response regulator PmrA from Erwinia tracheiphila SCR3

 Score =  174 bits (442), Expect = 9e-49
 Identities = 93/216 (43%), Positives = 136/216 (62%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           MK+L+VEDD  L   ++ AL   G+  + A  G++A     + ++ +IVLDLGLP  DG 
Sbjct: 1   MKLLIVEDDDLLLSGLVQALTSEGYAVDSATQGVEACILLNSGQYSLIVLDLGLPDRDGN 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            +L+  R E+I+ PV+IL+ARDTL  RVEGL+AGADDYL KPF  VEL AR+RA +RR  
Sbjct: 61  DLLRQWRREHIDLPVLILTARDTLEDRVEGLDAGADDYLIKPFAFVELKARVRALIRRYQ 120

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
           G +  ++Q GD+SL+  + +V    Q + +T  E+ ++   +    + + R  L   +Y 
Sbjct: 121 GRSDNLLQHGDISLNLSSRQVYLDSQPIEITPKEFALLTRLLMRISQTVHRETLQHDLYS 180

Query: 181 QDFDRDSNTIEVFIGRIRKKIAPDVIKTVRGLGYQL 216
              D  SNT+EV I  +R+K+  D IKTVRG+GY+L
Sbjct: 181 WQDDTGSNTLEVHIHNLRRKLGKDRIKTVRGVGYRL 216