Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., Transcriptional regulatory protein CusR from Alteromonas macleodii MIT1002

 Score =  163 bits (412), Expect = 3e-45
 Identities = 83/220 (37%), Positives = 137/220 (62%), Gaps = 4/220 (1%)

Query: 1   MKILVVEDDVQLGQQILSALEQTGWVPELAQDGIDALYRATAEEWDVIVLDLGLPKLDGL 60
           MKILVVED+V+ G  I   L ++G+V EL + G+D  +++   ++++IVLD+ LP ++G 
Sbjct: 1   MKILVVEDEVKTGDYIKQGLIESGFVVELVRTGLDGHHKSMIGDYELIVLDVMLPDIEGW 60

Query: 61  TVLKGIRDENINTPVVILSARDTLTQRVEGLNAGADDYLTKPFEMVELIARIRAQLRRAS 120
            +L  +R+    TPV+ L+ARD +  RV+GL  GADDYL KPF   EL+AR+R  +RR +
Sbjct: 61  KILSSLRETGKFTPVLFLTARDHVNDRVKGLELGADDYLVKPFAFAELLARVRTLIRRGT 120

Query: 121 GNASPVMQVGDLSLDTRTSKVMWQGQAVSLTALEYKVIAYFMHNPEKVISRTELVEHIYK 180
              +  + + DL LD  +      G+ ++LT  E+ ++   +    +V+ R+ +   ++ 
Sbjct: 121 SVPNNTLHIADLELDIPSRVAKRGGKVINLTTKEFTLLELMVRRQGEVLPRSLIASQVWD 180

Query: 181 QDFDRDSNTIEVFIGRIRKKIAPD----VIKTVRGLGYQL 216
            +FD D+N I+V I R+R KI  D    +I+TVRG+GY++
Sbjct: 181 MNFDSDTNVIDVAIRRLRAKIDDDFPVKLIQTVRGMGYKM 220