Pairwise Alignments

Query, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 818 a.a., DEAD/DEAH box helicase family protein from Rhodanobacter sp000427505 FW510-R12

 Score = 63.9 bits (154), Expect = 2e-14
 Identities = 102/448 (22%), Positives = 171/448 (38%), Gaps = 99/448 (22%)

Query: 5   RPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELA-RLARG----RVLVLAHVKE 59
           R YQ +++ A V    +     ++V+ TG GK+    ++  RL +     R+L LA    
Sbjct: 167 RYYQRNAINAAVEAIAKGQNRILLVMATGTGKTYTAFQIIWRLWKAGQKKRILFLADRNV 226

Query: 60  LVEQNHAK-YEGYGLTGAIFSAGLG-------------------RKETDQQVVFASVQSV 99
           LV+Q     +  +G   A  S                       R+      ++  +   
Sbjct: 227 LVDQTMVNDFRPFGPAMAKLSTASKTIERADGTEIELTLALDKRRRIDPAYEIYLGLYQA 286

Query: 100 VRNLSEFQNQF--------SLLVIDECHRVPDDKNSSYQKVITHLLELNPGMKVLGLTAT 151
           +    E Q  F         L+VIDECHR    ++S+++++    LE       +GLTAT
Sbjct: 287 ITGPEERQKLFREFSPDFFDLIVIDECHRGSAAEDSAWREI----LEYFSSATQIGLTAT 342

Query: 152 PYRLGMGWIYQYHTRGLVRSEEPRFFRDCIFELPIHYLLDEGFLTPAQLI----DTPVMS 207
           P      ++   H           +F + ++   +   + +GFL P ++I    D  V  
Sbjct: 343 PKETE--YVSNIH-----------YFGEPVYTYSLKQGISDGFLAPYKVIKVHLDVDVQG 389

Query: 208 YDFSQLKPANTGR---------YRESELD---LVIEQSQRATPQIVAQIIELAKARQGVM 255
           Y   + K   T +         Y E + D   ++ E++QR    I   + +     Q  +
Sbjct: 390 Y---RPKSGETDKHGYLIDDRLYNEKDFDRTLVIDERTQRVAKWISDYLKQSGDRFQKTI 446

Query: 256 IFAATVRHAEEIYRLLPTEHAALV----------IGDTPTPERDRIIQAFKQQQIKFLVN 305
           +F     HA  + + L  E+A LV           GD    E    +  F   +  + V 
Sbjct: 447 VFCVDTEHAARMRQALINENADLVQQNARYVMRITGDDN--EGTAQLGNFIDPESPYPVI 504

Query: 306 VS---VLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRL--------------AAGKS 348
           V+   +L+TG DA    LI + R   S++ ++QIVGRG R+                  +
Sbjct: 505 VTTSRLLSTGVDAQTCRLIVLDREVGSMTEFKQIVGRGTRVHEDTHKYYFTLVDFRKATN 564

Query: 349 DCLVLDYAGNQYDLYQP-EVGDPKPDSD 375
                D+ G    +YQP E   P P  D
Sbjct: 565 HFADPDFDGEPVQIYQPDEYDSPVPPED 592